Austrofundulus limnaeus (annual killifish): 106510903
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Entry
106510903 CDS
T06063
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106510903
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alim01009
]
106510903
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106510903
Protein phosphatases and associated proteins [BR:
alim01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106510903
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Protocadherins
106510903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
106510903
NCBI-ProteinID:
XP_013855089
UniProt:
A0A2I4AHX2
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MNLASRVHALVILLTCLVLLCKAQERDYIVKEEQPENVRIGNLRKDLDLHLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTSHRIDREKLCSGVFNEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVNEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGSPPKSSTAILQVTIS
DVNDNRPIFKDSELEVSVPENAPMGTSVAQLHATDADLGPNAQIHFAFSSQVSFSTKRHF
AINSSTGLITVKQPLDREVTPVHKLIVLASDGSSSPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNSPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLGPDAPDGFNVDRQSGILSVGKRLDREKHERYSFTV
IARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDSDAG
DNAVITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSTSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTNPGSVVTRVFAIDNDTGMNAELHYSIISSII
ITSRVSPRGLFSIDKTTGNITLQEKIVLADQGLHRLVVKVKDLGQPESLHAITLVHLFVN
DTVSNATFIQEQLRRSMETPLDRNIGDNEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRQKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPEDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECGCQGGFKTAGQITTRQEMAL
NPPHYGTLCGTGTARSHRIKINL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggcaagtcgggtgcatgcactggtgatcttgctgacctgtttggtcttacta
tgcaaggcccaggagagggactacatcgtgaaggaggagcagccagagaatgtccgcatt
gggaatctgcgcaaggacctcgacctccatctcgaccctaacatcaggctatcatcgccg
ctgcagtttaagcctgtgtacaaaacgggcgacgtgcctttggtgagggtggaggccaac
acgggggagatttttaccaccagtcacagaattgaccgggagaagctgtgctcaggggtc
ttcaacgagaaacgctgctactacgagatcgaggtggctgtgctgcccgacgagatcttc
agattggttaagattcgtttcctgatcgaggacgtcaacgacaatgcgcccctttttcaa
tccactgttataaacatctcaatcccagagaacacagccatcaacacccgatacccggtg
ccatcggcctttgaccctgacgtggggataaatggaattcaacattatgagctggtcaag
agtgtcaatgagtttggcttagacatcattgagacccctgaaggagacaagtggcctcaa
ctcatcgttcagcagaaccttgatcgggagcaaaaagacacctttgtaatgaagatcaag
gtggaggatggtggcagccctcccaagtccagcactgctattctccaagttaccatctca
gatgttaatgacaatcgccctatcttcaaggacagtgagctggaggtctcagtgccagag
aatgctccaatggggacatctgtcgcacagctacatgccacagatgcagacttgggtccc
aatgcacaaatccactttgctttcagcagccaggtctccttctctaccaaacgccacttt
gctatcaacagttctactgggctgatcactgtgaagcaaccgttggacagagaggtaacg
cctgttcataaactcatcgtcctcgcaagtgatggcagctcaagtccatccagagctaca
gtgattgttaatgtcaccgatgtcaatgacaatgtgccctccatagacactcgctacatc
atcaaccttgtaaatgggactgttctgctctcggagaatgcacctctcaacacaaaaata
gcccttataactgtaactgacaaggatgcagatctctacggcaaagtggcttgctacacc
gaccatgatgttcctttccggttaaagccagtctttaatgatcagtttttactagagaca
gctgctcctcttgattatgagacaacccgagaatatgctattaagatcgtggcctcagat
agagggacacctcctttaaatacttcagctatggttctaattaaaatcaaggatgagaat
gacaattcacctatctttccccagcctgaaattcagctttccataccagagaacaatgac
ccttcaacacagttaataaaaatcagtgccacagatgcggatagtggacataatgctgag
attatttacacccttggccctgatgcacctgatgggtttaatgtggacagacagtcagga
attctctctgttgggaagcgactagacagagagaaacacgagaggtactcattcactgtc
attgcaagagacaatggttcaacccccctacagagcaatgtcactgttaggctaattgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctatgtgcct
gagaacctgcctctctatggcactgttggtttaatcacagtgactgattcagatgcagga
gataatgctgttataaccctatccattttgaatgggaaagacaatttcatcattgaccca
caaactggtgtgattaaacctaacatcacttttgacagggagcagcaaagctcctacaca
tttatggtcaaagcagttgatggagggcagcctcccagcacgtcttatgccaaggtcact
attaatgtagtagatgtgaatgacaatcgccctgtatttgtcattccttcctccaattac
tcatatgacctagtacggaccactaccaaccctggttctgtggtcacccgagtgtttgcc
atagacaatgacacaggtatgaacgctgagctgcattatagtattatcagtagcatcatc
atcacatctagggtctcccctcgaggtctcttttccattgacaaaacaacgggtaacata
acgttgcaagagaaaatagtattggctgatcagggactgcataggctggtagtcaaggtt
aaagatttaggccagcctgagtcattacatgctatcactcttgttcacctgtttgtcaat
gacactgtgtcaaatgctacctttatccaagagcagctgcggagaagtatggaaacacca
ttggatcgtaacataggggacaacgaggtaacacctcaagctaatggatatgtaattgtt
gtaattgctattatagcaggaaccatgactgtcatcttggtgatatttgtcactgccttg
gtgcgatgccggcagacacccagacagaaagtagttcagaagggtaagcagagtggagag
tgggtgtcacccaaccaagaaaatcgtcagatcaagaagaagaagaagagaaagaagcga
tctcccaagagccttctcttgaactttgtgactatagatgaatccaagcctgaagacccc
acacatgagcacgttaatggtacactggatctccctgtggagctggaagagcaaacaatg
ggaaagtataattgggcgaccacacccacgaccttcaaacctgacagcccagatttagcc
aagcattacaagtcggcatcccctcagcctacatttcaaatcaaaccagaaactcctgtg
gcccctaagaaacatcacgtgatccaggagctcccattggacaacacatttgtggtgggc
tgtgactcactctccaagtgttcatcgactagctccgacccgtacagtgtctcagagtgc
ggctgtcaggggggattcaagactgcggggcaaatcaccacccggcaggagatggcactg
aacccaccacactatggcacactctgtggcacaggtacagctcgctcccacaggattaaa
atcaatctctag
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integrated database retrieval system
