Austrofundulus limnaeus (annual killifish): 106510952
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Entry
106510952 CDS
T06063
Symbol
rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03010
Ribosome
alim04120
Ubiquitin mediated proteolysis
alim04137
Mitophagy - animal
alim04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
106510952 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106510952 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106510952 (rps27a)
04137 Mitophagy - animal
106510952 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
alim03011
]
106510952 (rps27a)
04121 Ubiquitin system [BR:
alim04121
]
106510952 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106510952 (rps27a)
Ribosome [BR:
alim03011
]
Ribosomal proteins
Eukaryotes
Small subunit
106510952 (rps27a)
Archaea
106510952 (rps27a)
Ubiquitin system [BR:
alim04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
106510952 (rps27a)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106510952 (rps27a)
Exosomal proteins of colorectal cancer cells
106510952 (rps27a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
106510952
NCBI-ProteinID:
XP_013855143
UniProt:
A0A2I4AI00
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgttaaaacgctcacggggaaaactataaccctcgaggttgagccctca
gataccattgaaaatgtcaaggctaagatccaggacaaagagggaatccctcctgatcag
cagaggttgatctttgctggaaaacagctggaagatggacgcacgctgtctgactacaat
attcagaaggagtcaactctccacttggtactgaggctgcgaggaggtgccaagaaaagg
aagaagaagtcctacaccaccccgaaaaagaacaagcacaagaggaagaaggttaaactt
gctgtgctcaaatattacaaggtggatgagaatggtaaaatccaccgtctgaggcgtgag
tgtcctgctgacgagtgtggtgctggtgtcttcatggcaagccactttgaccgtcactac
tgcgggaagtgctgcctgacctactgcttcaacaaacctgaggacaagtag
DBGET
integrated database retrieval system
