Austrofundulus limnaeus (annual killifish): 106511038
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Entry
106511038 CDS
T06063
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 1-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alim01009
]
106511038
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106511038
Protein phosphatases and associated proteins [BR:
alim01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106511038
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106511038
mRNA cycle factors
Stress granule specific factors
106511038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
SAS-6_N
Motif
Other DBs
NCBI-GeneID:
106511038
NCBI-ProteinID:
XP_013855233
UniProt:
A0A2I4AI82
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MRTPRNPGRNPDGITHTMELNALCVKLGKKPNYTPIDSYPGMRPPNFNYNVRAPGPYQRS
MQQYYYPFPPVGPMIYHMELSVGGQQFFGKGRTRQIAKHEATTKALKVLQKEPVLQQCPV
MNGEPEEENLNKSEISQVFEISLKRNLPVYFEVLKEEGPPHMKSFVVRVAVGEFVGEGEG
KSKKIAKKLAAAAVLNELKRLPHMPSVEKKLPRIKKKTKSIIKLQTSPEYGQGMNPISRL
AQNQQAKKEKEPEYATVTERGLPRRREFVMQVTVCGQSAEGMGPSKKVAKRNAAEKMLEL
LGYKVPQPPKPALKTDEKTPVRKPSDGRKVTFFEPGSVEEVTLGSKEEDFCMPYLSPQQL
PAGILPMVPEVAQAVRACQGSQARDYSRAVPNPGKATITAMIANELLYAGTSMTTETILK
KKNNVNQLPHGPITRPSEQLGYLASEQNLQVDYTDFPKNNMNVFVSLINRSSQPPLISHG
IGKDVESCHDMAALNILKLLSELDLQSNERTGNGPSSGCSKQANSSTLAQTLDGKA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaccccgcaacccgggcaggaacccagatggcattacgcataccatggagctg
aatgctctttgtgtcaagctcggtaaaaagccgaactatacacccatcgactcgtaccca
gggatgagaccgccaaactttaactacaacgtccgggctcctgggccttaccagcgctcg
atgcaacagtactactatccatttcctccagtgggaccaatgatctaccacatggagctt
tctgtaggaggtcagcagttttttgggaaggggcgtacgaggcagatagccaaacacgaa
gccactaccaaggctttgaaagtgctgcagaaggaacctgtactgcagcagtgtccagtg
atgaacggtgaacctgaggaggagaacttaaacaaatcagaaatcagtcaagtgtttgaa
atatctctgaagcggaacttacccgtctactttgaggttttaaaagaagagggtcctcca
cacatgaaaagttttgtagtgcgtgttgcagtcggtgagttcgtgggagaaggagagggg
aaaagcaaaaagattgccaagaagctggcagcagcggcagtgctgaacgagctgaagcgg
ctgccccacatgccgagcgtggaaaagaagctgccgcgcatcaaaaagaaaaccaaatcc
atcatcaagctgcagaccagccccgagtacggccagggcatgaatcccatcagccgcttg
gctcagaaccagcaagctaagaaggagaaggagcctgagtacgccacggttacagaacga
ggcctgccacgacgcagggagttcgtcatgcaggtgactgtgtgtggccagtcagcagag
gggatgggaccgagtaagaaggtggccaagaggaacgcagcagagaaaatgctggaactc
ctaggatataaagtgcctcagcctcccaaaccagctcttaaaactgatgaaaaaactcct
gtgagaaaaccaagtgacgggcgcaaagtgaccttctttgaaccgggttctgtggaggag
gtgacgttgggttctaaagaggaggacttctgcatgccttacctcagcccccagcagctg
cctgcaggcattctgcccatggtgcctgaggtggcccaagcagtccgagcctgccaggga
tctcaggccagggactacagccgagctgtgcccaacccaggcaaggccaccatcactgcc
atgattgccaacgagctgctctatgctgggacatccatgaccaccgagactatcctaaag
aagaaaaacaacgtgaaccagctgccccacggccccatcaccaggccgtcggagcagctc
ggatatcttgcatctgagcagaacttgcaggtggattacacagactttcccaaaaacaat
atgaacgtgtttgtgtcgctgattaaccgctcctcccagcctccactcatcagtcatggg
attggaaaagacgtggaatcctgtcatgatatggctgctctgaatatattaaagttgctc
tctgaacttgacctgcagtcaaatgaaaggacaggaaatggaccaagctcaggatgcagc
aaacaggctaactcaagcacattggcacagacacttgatggcaaagcttag
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