Austrofundulus limnaeus (annual killifish): 106511684
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Entry
106511684 CDS
T06063
Symbol
fam188b
Name
(RefSeq) protein FAM188B isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106511684 (fam188b)
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106511684 (fam188b)
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
106511684 (fam188b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Alveol-reg_P311
CtpB_N-like
Motif
Other DBs
NCBI-GeneID:
106511684
NCBI-ProteinID:
XP_013855887
UniProt:
A0A2I4AK82
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MVASAEEVSSSLVREYLSRKGLKRTIACMDEEHPRTEASINNRSHLRQILNIEDLYRKNK
VLRTPLKTLLEIIVKHHIEQLNSDKLISGHCSQMMQTISSPVSKPLKNDAKADEVTPAVV
GSKRRSEXNVACPSEPTCVSLEKEIPTSFNPTDHMTXKSDYQKSKPVLASQQDNEIFPQK
EADRSTSVTSVTQKNRTNHSRRGMLAGPVPQESNRKKQSRKVEVSQVFLRKDEENRRFTD
VYLKSSLTQNSAARSVESTAERNRDQSSCGKMEKNTLKTSIVNPRLNVSDLNVSEIVLDD
IDDEEEDLPVVSVQRNVPEFHYSGCAMDQQTATELKTILLGSSLNCFSVEWMNQGFTFSE
IDDLRYGIVQKKGGPCGVLASVQAFVLKKLLFENADSGITTLQRLRPSNSTRRRCLVLAL
AEVLWRAGKETQATVAINSGTNHFTPCGHYRSEGVFEKIIYFSLDNIKDLESLLEQHIDQ
FERGMLGCVLLTVSAVLSRSIERIKEDMDVPTTTLIAAHGYCTQELVNLLLCGRAASNVF
DNDMELDSGSGDMTLLKGIKDPCQVGLLSLFEHYNICKVGTYLKSPSFPIWVVCSESHFS
MLFGLQRALVTNPEGGVEFDLYYYDGLANQQEEIRLTVSVGKSSKSFQEVDSDLIPPLEL
CIRTKWKDASVNWNDTEPLL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttcagccgaagaggtgtcttcatcccttgtaagggaatatttgagtcgaaag
ggactgaaaagaaccatcgcctgtatggatgaggagcatccacgcacagaggccagtatc
aataacagatcacatctgaggcagattctcaacatagaggatctctacagaaaaaataaa
gtactgaggacccccctgaaaacactgcttgagattatcgtgaagcaccacattgaacag
ttaaacagtgacaagctcattagcggacactgttcacaratgatgcaaactatcagctct
cctgtaagtaaaccattaaaaaatgacgcaaaggcagacgaagtgacgccggctgtcgtt
ggcagcaaacgaaggtctgaaamaaacgtagcatgcccctctgaaccaacatgtgtgtcg
ttggagaaagagatcccaactagttttaatccaacagatcatatgacttrtaaatcagat
taccaaaaaagcaaaccagtgctggcttcccaacaagacaatgaaatctttccgcaaaag
gaggcagacagaagcacttccgttacttctgttacccagaagaacagaaccaatcacagc
agacgaggcatgttggctggaccggtaccacaggaatcaaacagaaaaaagcaaagccga
aaagttgaagtgtcgcaggtgtttctcagaaaagatgaggaaaacagacgttttactgac
gtatatttaaaaagcagtctaactcagaacagcgcagccagaagtgtagagagcacggcg
gagaggaaccgggatcagagcagctgtgggaaaatggaaaagaacacattgaaaacaagc
atagtaaaccctagactgaatgtctctgatttgaatgtgtcagagatagttttagatgat
attgatgatgaggaggaagatctgccagtagtgtctgttcagaggaatgttccagagttt
cactattcaggctgtgctatggaccaacagactgccacagarttgaaaactattcttctt
ggttccagcttaaattgtttcagtgttgagtggatgaatcagggtttcaccttttctgag
attgatgacctcagatatggcattgtgcaaaaaaagggtggtccttgtggagttctggca
tctgttcaagcatttgttctgaagaagcttctgtttgaaaacgcagatagcggtattact
acgcttcagaggctacgaccttccaacagcaccagaagacggtgtcttgttttagctctg
gctgaagtattgtggagggcaggcaaggaaacacaagccacagttgcaataaactctggg
acaaatcatttcactccatgtggacactacagatctgaaggtgtatttgaaaagattatt
tatttctctctggataacattaaggatctggagtcccttctggagcagcacatagaccag
tttgaaagagggatgctaggatgtgttctgctgaccgtatcagcggttctctctcgatcc
attgaaagaataaaagaggacatggacgtgcccaccaccacactgattgctgcccatggc
tactgcactcaggagctggtcaatctgttgctttgtggcagagcagcttctaatgtgttt
gacaatgacatggagctggactcaggcagtggtgacatgactctgctcaaggggatcaaa
gacccctgtcaagttggcctgctgtccctgtttgaacattacaatatctgtaaggtagga
acttacctgaagagtccctccttccccatctgggtggtgtgcagtgaaagccatttcagt
atgctgttcggcctgcagagggcgctggtgaccaatccggaaggaggtgtggagtttgac
ctttattactatgatggactggccaatcaacaggaggagattcgcctcactgtttctgtt
ggcaaatcatctaaaagctttcaggaagttgattctgatcttattcctcctctcgagctt
tgtatccgaacaaagtggaaagatgcatcggtcaactggaacgacacagaacctctgctc
taa
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