Austrofundulus limnaeus (annual killifish): 106512943
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Entry
106512943 CDS
T06063
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04622
RIG-I-like receptor signaling pathway
alim05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106512943 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106512943 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alim04054
]
106512943 (ifih1)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106512943 (ifih1)
Pattern recognition receptors [BR:
alim04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
106512943 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
DEAD
Helicase_C
ResIII
CARD
SWI2_SNF2
AAA_19
AAA_22
AAA
C1_4
Motif
Other DBs
NCBI-GeneID:
106512943
NCBI-ProteinID:
XP_013856958
UniProt:
A0A2I4ANA0
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MESASDEIQERLIEGFRLRLEKNITVAPTLNHLAFIQPEEKEQIIQKLRSDGEICAARLL
ITVVLKKPHSEGWFRAFVDGLILGGSELAAKYLELNPPSPDVEEENDYCVKLIQILAPGL
ETMKTEEVCAECFSSEIITEDDKEKILAETRNKGSRSGASELLRRIVKRPPGWFSTFLDV
LRKTEHKHLYELTGGSPECEPCEKSLNGEPAVETKEIRFTEEPQDDPTDLYASADMPEST
DASNPGDLGAAAAATKSPEKAEITLWDYQMEVARPALEGKNIIICLPTGSGKTRVAVYVT
KKHLDSRREEGKPGKVIILVNKIPLVEQHFTTEFSPYLKPKYKVERVSGDSQLKISFAKT
VQRNDVLICTAQILENYLERANSGEDEGVKLSDLTLIIIDECHHTQKGGVYNHIMMRYLK
QKHKNIRRKKEEKDPIPLPQILGLTASPGVGKANTMDKAVEHIMRICANLDASNIMTRSL
GEDQKKLRKITMTAEDRKEDPFGDVIKTIMNAIHDHAKFSPTCDLGSQNYEQWAVQKERQ
AAKEENQIERVCAEYLRRYNEGLILSNTIRMCDALRCLNKFHEEQIKKKSSVDEEQNIQI
TDTERFLFKQFKDKKEMLEKLAKIPEYENDSLAKLKSKILQEFSTRQEARGIIFTKTRHS
AITLSQWIQENPKFADIGVKPSHVIGGGDQSDVKPMTAAEQKDVLKKFKTGEVNLLVATT
VAEEGLDIPACNFVIRYGLSTNEIAMIQAQGRGRAEDSSYTVVDVKNSGVAEKECVNEHR
EDMMNKAIKKIKTYSSDKYNEKIDEFQIQAIMEERVRQVKQKQKAIKDESPSAVKFSCRG
CSENICSGEDINIIENMHRVNVTPQFKELFNLRENAALQERLLDYETNGVIACKICGQTW
GSMMMYRGIECPCLHVKNFVVDIRGKKISNCTKWSDLPVRFSSFDYAEYAYQMAQSSDDE
EAD
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgcgagcgacgaaatccaagaacgtctcattgaaggctttaggttgaggctg
gaaaaaaacataacagtggcgccgactctgaaccatttggcgttcattcagcccgaggaa
aaagagcagattatacaaaaactgaggtcggacggcgagatatgtgctgccaggctgctg
atcaccgtggttcttaaaaagccccacagtgagggctggttcagggccttcgtggacggt
ttaatactcgggggttcggaacttgctgccaagtatttggagttaaaccccccgagccct
gatgtggaggaggagaaygattactgcgtaaagcttattcagatactggctcccggtctt
gagaccatgaagacagaagaagtgtgtgccgaatgtttctccagcgagattatcactgag
gatgacaaggagaaaattttagctgaaacaagaaacaaaggatcacggagcggagcctca
gaacttctgaggagaattgtgaaacgcccccctggatggttctcgacatttctagatgtt
ctgcgtaaaactgagcacaagcacctgtatgagctgaccggaggatcacctgagtgtgaa
ccatgtgagaaatcactgaatggtgagcctgcagtggagaccaaggaaatccgtttcact
gaggagcctcaggatgatcccacagatctgtatgccagtgctgacatgccagaaagcacg
gacgcctcaaatccaggtgacttaggagcagctgcagcagcaactaaaagccctgagaaa
gcagaaatcactctctgggattatcagatggaagtcgctagacctgccttggaggggaaa
aacataataatatgcctcccgacaggaagtggtaaaaccagagtcgcggtgtacgttact
aagaaacatctggacagcaggagggaggaggggaaaccagggaaggtgatcatcctggtg
aacaagattcctctcgttgagcagcatttcaccactgagttttcgccwtatctaaaaccc
aaatacaaagtggagagagtcagcggagactcccagctcaaaatctcttttgccaagact
gtgcagagaaatgacgtcctcatctgcacggctcagattctggaaaactacttggagagg
gctaacagtggagaggatgaaggggtgaagctgagtgatctcacgttgatcataatagat
gaatgtcaccacactcagaaaggaggtgtctacaaccacataatgatgcgatatttgaag
caaaagcacaagaacataaggcgcaagaaggaggagaaggatcccattccactccctcag
atcctgggcctgacygcctcgcctggtgttggaaaagccaacacaatggacaaagctgtg
gagcacataatgagaatttgtgcgaacctagatgcttcaaatatcatgacgaggagcctt
ggagaggaccagaagaagctaagaaaaataaccatgactgctgaagacagaaaagaggat
ccatttggtgatgtgataaagacaatcatgaatgccattcatgatcatgccaagttcagc
cccacctgtgacctgggctctcagaattatgaacagtgggctgttcaaaaagagagacaa
gctgccaaagaggagaatcagatagagcgagtttgcgctgagtacctccggcggtacaac
gagggcttgattctcagcaacaccattcggatgtgcgacgccctcaggtgtctgaacaaa
ttccatgaggagcaaataaagaagaagtcatcagtagatgaggagcagaacatacagatc
accgatacagagagattcctcttcaagcagtttaaagacaaaaaagagatgctggagaag
cttgcaaagattccagagtatgagaacgacagcctggcaaaattaaaaagtaagattttg
caggagttcagcactaggcaggaggccagagggatcattttcactaaaacacgtcacagc
gccattactctaagccagtggattcaggaaaaccccaagtttgccgacatcggagtgaaa
ccatcacatgttattggaggaggagaccagagtgatgttaaaccaatgactgctgctgag
caaaaggatgtactgaaaaaattcaaaaccggtgaagtcaacttgctggttgctaccacg
gtggcagaggaaggtttggacatacccgcctgcaattttgtcatccgatatggtctttca
accaatgagatcgccatgattcaggctcaaggcagaggaagagctgaggacagctcttac
actgtagtagatgtaaagaactctggtgtggctgaaaaagagtgtgtcaatgagcaccgg
gaggatatgatgaataaagccatcaagaaaatcaaaacctattcttcagataaatataat
gaaaagatcgacgagtttcagattcaggctataatggaggagagagtgagacaggtgaag
cagaagcagaaggccatcaaggatgagagtccatctgctgtcaagttcagctgtcgaggc
tgcagcgagaacatctgcagcggtgaagacatcaacatcatcgaaaacatgcacagagtc
aacgttaccccacagttcaaggaacttttcaatctcagagaaaatgctgctcttcaggag
cgacttttggactatgagaccaatggtgtcatagcttgcaaaatctgtggccagacatgg
ggttcgatgatgatgtaccgtgggattgagtgtccctgcctccacgtgaaaaactttgtg
gtcgatattagagggaaaaagatcagcaactgcaccaagtggagtgacctccccgtcagg
ttttcctcattcgactacgccgagtacgcttaccagatggcccaaagctccgacgatgaa
gaagcagattga
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