Austrofundulus limnaeus (annual killifish): 106512997
Help
Entry
106512997 CDS
T06063
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106512997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106512997
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
106512997
REST complex
106512997
Heterochromatin formation proteins
Other heterochromatin formation proteins
106512997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
106512997
NCBI-ProteinID:
XP_013857067
UniProt:
A0A2I4ANI6
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MKRRAEDQDPIFTPQQQQPRRPPVQCIAESFQHRALAPAPSPVVEAPAENMQPSTGIQYS
LPQGYQVPAMPQSTSGHGHNSATPHISPHAHSLAVQSQSPAVVQGHVHPPAPLPSAQGQQ
QQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGH
PDLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGVSVQNIPASGASSQLPSHHQ
HQNLPQTALNTTSTPPLATQPAINKTSKPVQSPAHTPTSQPNPSIPAYASPRSPSVQPHT
PVSSTPTAGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKE
AGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSMLLGKGALDGAESVRNDH
GPTVKRPSLNNKQRLNQNGLPIRRPSGVGATPPPKKKSLVMGKGHGLSEVGKLSTSTETM
FFEKVKKALRSSEAYDNFLRCLHIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLGYR
ESSHGDLGHAESLPKERSTEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCREV
LNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDIVLETNLATIRALETVQRRL
SRMSAEEQVRFRLDNTMGGSSEVIHRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLK
MKEEEWKEAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYEDR
QEQASEETAAPPPSAPHMTLTYDDSQILEDAAGLIIHHVKRQVGIQKEDKFKIKQIIHHF
IPDLLFAQRGELSDLEEEEEEGDDVETNLDGPKKHNGLPGRSPTKSKLLFSSTAAQKLRG
ADDVYNLFFVNNYWYVFFRLHHILCSRLLRIYGQAERQIEEDAHERDVLGLKREKNENPA
IQLKMKEPMEVEVDEYYSVFLEMVRNLLDGNMEPANYEDSLREMFTIHAYIAFTMDKLIQ
SIVRQLQHLVTDDICARVTDMYLSESASKATGGAVSTQTSRAAAEGTYQRKAEQLMSDEN
CFKLMFMKNRGSVSLALELLDTEEENSDEPADAEKWSDYVSRYLTSDSASPELREHLAQK
PVFLPRNLRRIRKCQRGWEQLQQERLTKGSSDKSQESSSELKMKCMFKLNSYKMVYVCKS
EDYMYRHTALSRAHQSHQQVHTRLHRRFQTWLDDWASTHVTSEMSAKTLNWLRGEGQEGL
LPCTTTCCPEVLHYLNINKYRVKYRTL
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgygcagaagaccaagacccaatatttacaccccagcaacagcaaccacgt
cgccccccagttcagtgcattgcagaaagctttcagcaccgggctcttgccccggctccc
agtcctgtcgtagaggcacctgcagaaaacatgcagccctcaaccggcatccagtattct
ctcccacaaggctatcaggtgcctgcratgcctcaaagcacaagtggacatggacacaac
agtgctactcctcacattagtccacatgcacacagcctggccgttcagtcacagagccct
gccgttgtccaaggtcacgttcatccacctgcacccttgccttcagcccaaggacagcag
cagcagtttcagcgactaaaggttgaagatgccctctcytatctggatcaagtgaaactg
cagtttgggaatcagccacaagtttataatgatttccttgatattatgaaagagttcaaa
tcacaaagcatagacactcctggagtcatcaatcgtgtgtctcagctctttaagggccac
cctgacctcatcatgggcttyaacactttcctgccaccggggtataagattgaggttcaa
accaacgatctagtcaacgttaccacaccaggtcagattcactacattacccctcatggt
gtttctgtgcaaaacatccctgcaagtggggcatccagccaactcccgagccatcaccag
caccagaacctgccacagactgcgttgaacacaaccagtaccccgccgcttgctactcag
cctgctataaacaaaaccagcaagccagttcagtctccagcccatacgcccaccagccag
cccaatccatccatcccagcgtacgcctcaccacgttcaccttcagttcagccccacact
cctgtcagcagcacgccaaccgctggtccacctctgcagaacaaccaaccagtggagttt
aaccacgctataaattatgtcaataagataaagaatcgctttcagggtcagccagacatt
tacaaagcctttctggaaatcttgcacacttaccagaaggagcagcgcaatgctaaagag
gctggtggtaattacacaccagcactgactgagcaggaggtctacactcaagtggcgaga
cttttcaagaaccaggaggacttgctgtcagagtttggacagtttctgcctgatgcgaac
agctcaatgcttttgggtaagggtgctcttgacggagcagaatccgtccgtaacgatcac
ggtcccacagtgaagagaccctcyctgaacaacaaacagaggctgaaccagaacggcctg
ccaatcaggagaccctctggggttggtgccacaccccctccaaagaagaaatctttagtc
atggggaagggccatggtttgtctgaagttggtaaactcagtacaagcactgaaacgatg
ttctttgaaaaggtgaagaaggctttacggagttctgaggcgtatgacaacttcctgcgg
tgtctgcacatcttcaaccaggaagtgatttctcgcaccgagctcgtccagttagttatc
ccatttctcggaaaattcccagagctttttacgtggtttaagaacttcctgggctaccga
gagtccagtcatggagacctaggccatgcagagagtttacccaaggagcgctctacagag
ggtattgccatggagatcgactacgcctcctgcaagaggctggggtccagctacagagca
ctgccgaagagctaccagcaacccaagtgcacaggaagaacaccgctgtgcagagaggtt
ctgaacgacacttgggtttcttttccatcttggtctgaggattctacatttgtgagctct
aaaaagactcagtacgaggagcatatttacagatgtgaggacgagcgttttgagcttgac
attgtgttggaaactaacctggctacgatccgagctctggagacggtgcaaaggaggctc
tctcgtatgtccgctgaggagcaggtgcgcttcaggctggacaacacgatgggcggctcc
tcagaggtcattcatcgcaaagccattcagaggatatacggagacaaagctcccgacatc
atcgacgggctcaagaaaaaccccgccgtgtctgtgcccatagttctgaaaagattaaaa
atgaaggaggaggagtggaaagaagcccagagaggcttcaacaaaatctggcgggaacag
aatgagaagtattacctgaagtctctcgaccaccagggcataaacttcaagcagaatgac
accaaagtgttgcgctccaagactttgctcaatgaaattgagatgttgtatgaagatcgc
caggaacaagcctcagaggaaaccgccgctccgccccccagcgcccctcacatgaccctg
acctacgacgacagccagatcctggaggacgccgcyggcctcatcatccatcatgtcaaa
cggcaagtaggcatccagaaggaagacaagtttaagatcaagcagatcatccaccacttc
atccccgacctcctgttcgcacaacgcggtgagctctccgacttggaggaagaggaggag
gaaggggacgacgtggagacgaatctggacggccccaagaagcacaacggcctgcccggc
cgcagccccaccaagtccaagctcctgttcagcagcacggcggctcagaaactgcggggc
gcmgacgacgtctacaacctgttcttcgtgaacaactactggtacgtcttctttcgcctc
caccacatcctctgttctcgcttgctgcgcatctacggccaagcggagaggcagatcgag
gaggacgctcacgagcgagacgtgttggggctgaagagggagaagaatgaaaatccagca
atccagctaaagatgaaggagccaatggaggttgaggtagacgagtactactctgtgttt
ctggaaatggtgcgaaaccttttggatggaaacatggagccggccaattacgaggactcc
ctgagagaaatgtttactatccacgcctacatcgccttcaccatggacaaactgattcag
agcattgtccgacagctccagcatcttgtcactgatgacatatgtgcgcgtgtgaccgac
atgtacctgagtgagagcgccagtaaagccacaggtggggcggtctccacgcaaacgtcc
agggctgctgcagaggggacgtaccagcgcaaagcagagcagctgatgtcagatgagaac
tgcttcaagttgatgtttatgaagaatcgagggtccgtcagtctggcgctggagctgctg
gacacggaggaggagaactctgacgagccggctgatgcagaaaagtggtcggattatgtg
agcaggtacctaacctcagattctgcctccccggagcttcgtgagcatttggcccagaaa
ccggttttcctccccaggaacttgaggcggataagaaagtgccagagaggatgggagcag
ctgcagcaggagagactcaccaaaggctcctcggacaagtcgcaggagagcagcagcgag
ctgaagatgaagtgcatgttcaaactgaactcctacaagatggtttatgtctgcaagtct
gaggactacatgtacaggcacacagcactgtcccgagcccatcagtcccaccagcaggtg
cacacccgcctccacagacggtttcagacctggctggacgactgggcctcgactcacgtg
acgagcgagatgtctgccaaaactctgaactggctgaggggagaaggacaagagggcctg
ttgccgtgcaccaccacctgctgccccgaggtcctccattatctcaacattaacaagtac
cgggtgaagtacaggacactgtag
DBGET
integrated database retrieval system
