Austrofundulus limnaeus (annual killifish): 106513098
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Entry
106513098 CDS
T06063
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106513098 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106513098 (xpc)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106513098 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
106513098
NCBI-ProteinID:
XP_013857223
UniProt:
A0A2I4AP04
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MQDHVERLRPPVLVSSNKSTGIISFEKKIESIMAKRRKCAEAAEEESDTKKLKRAVKGES
RGAKKREKKKDTVNDDTEEKLERKVHPKPRFSSKRAAKSSSSANVGTDVKTSKYFASPLK
EEVDSEDDFNMVTSAPPVVNVSAKELAREEEKEEDDSEDGDDWEEVEELAEPLGPVDPPE
PVLPSQPLEIEIETAEARKQKKRQAEVDTYLRRMMKRFKKDLLIDTHKVHILCLVANGMF
RNRLCSQPDLLAITLSLLPSHFCAVAKERIDQNYLSGLLKWFKATFTLNPSLSCEERLDP
QALLERRLASLSAKDHQEMTHIFLLILRSLQLFCRLVLSLQPVPFKPPSAKCKGARKSTS
APERCQSQETSKTNSAEPKASRSTKRPPGGGKTKSSTVGKGRGKETEEEKEEKPVSSGGQ
RPKNSKRRSVASKVSYKEDSNSEGEGDDEELSDAEEFQATSEGDSEDSESEAESSKRKTG
KAKRKARSTNNKNATTPKRRSGGKKRKSSEDDSELEESKGDDEDEGVACNKSKRQSGRSK
EGPGADEWIEVYVNKTSSWVCVDVQQGVGVPHLCSQNATAPLTYVVAVDGNGFLKDLGRK
YDPTWMTSSRKRRVDDEWWEETLQPFLGPEDERDKKEEKELQDKLLNKPLPISVAEYKNH
PLYALKRHLLKYEALYPSTATVLGYCRGEPVYSRDCVHTLHSRELWLKEARTVRIGEEPF
KMVKGFSNRSRKARMMSETKDEKDLPLFGEWQTEEYQPPIAVDGKVPRNEYGNVYLFKAC
MIPVGCVHVRLPNLHRVARKLNLDAVPAVTGFDYHGGYSHAVTDGYIVCEEDEEILRAAW
VEEQEIQKQKQKEKKEKRAIGNWALLVKGLLIKERLKKRYNKKPQGLGNLAHEDDAGGFS
SDEEVVEGDASGAKTASETLAMSWPQNRQAEEEDRSGSRSKRKTTRRGKKSQEKHLFPFE
KV
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaccatgtggagcgtttgcggccgcctgtgttagtttcgtctaacaaatctaca
ggaattatttcatttgaaaaaaagattgaaagcatcatggcaaagcggagaaagtgtgca
gaggcagccgaagaagaatccgatacaaagaaactaaagcgggcggtgaaaggagaaagt
agaggagcaaagaaaagagagaagaagaaagatacagttaatgatgatacagaggagaaa
cttgagaggaaggtccaccccaaaccacgtttttcctcaaaacgagcagccaagagttct
tccagcgccaacgtcggcactgatgtgaaaaccagtaaatactttgcgtctccgttgaag
gaggaggttgatagtgaggatgacttcaacatggtgacctctgcaccacctgtggttaac
gtgagcgccaaggaactggcgagagaagaagagaaagaggaggatgacagtgaggatgga
gatgactgggaggaagtggaagagttggctgaacctcttggtccagtcgacccacctgag
ccggtcctgccctctcagcccttagagatcgagatagagacggcagaagccagaaagcag
aaaaagaggcaggcagaggtggatacatacctccggcgaatgatgaagaggtttaaaaag
gacctgctgatcgacacacacaaggtccacatcttgtgcctcgtagccaacgggatgttt
cgcaaccgtctgtgcagccaaccggacctcctggccatcaccctgtccctgctgccgtcc
cacttttgcgcagtcgccaaggaacgcatcgaccaaaactacctctctggactgcttaaa
tggtttaaagcaacgtttaccctcaaccccagtctttcctgtgaggaacgtctggaccct
caggctctcctggagaggcggctggcctccctctccgccaaagaccaccaagaaatgacg
catatttttcttttaattctgaggtctttgcagcttttctgccgattggttctttcatta
cagccagttccgttcaaaccaccttcagccaagtgcaaaggagccagaaaatcaacctcg
gctccagaacggtgtcaaagtcaggagacgtccaagaccaactctgcagagccgaaagcc
tctcggagcacaaagagaccaccaggaggagggaaaacaaaaagcagcactgtaggcaaa
ggaagggggaaagaaactgaggaggagaaagaggagaagcccgtgtcttcaggaggacag
agacccaaaaattcaaaacgccgcagtgttgcttcaaaggtcagctacaaggaggatagc
aacagtgaaggggagggtgacgatgaggagcttagtgatgcggaggagtttcaggcaacc
agtgagggtgacagtgaggattcagagagcgaggcagaatcttcaaaaaggaagacgggg
aaagcaaagaggaaggccagatcaacaaacaacaaaaatgcgacaactccaaaaagaaga
agcggtgggaaaaaacggaaaagctctgaggacgacagtgagttggaggaaagtaaagga
gatgatgaagatgaaggtgtagcatgcaacaaaagcaaaagacagagtgggagaagcaaa
gaggggcctggagcagacgagtggatcgaggtgtacgtcaacaaaacgtcttcctgggtt
tgtgtagatgtgcaacaaggagtgggcgtgcctcacctctgctcccagaatgcaacagca
ccactgacgtacgtggtggccgtggacggaaacgggtttctaaaggacctgggaagaaaa
tatgaccccacctggatgacgtcatccaggaagaggcgggtggatgacgaatggtgggaa
gaaacgctccaaccgttcttgggccctgaggatgagagagacaaaaaggaggagaaggag
ctccaggataagcttttgaacaaacccctgcccatctctgtagcagagtacaagaaccat
cctctgtatgccttaaagagacacctgctcaagtacgaagctctctatccttctacggcc
accgtcctcgggtactgcagaggagaacctgtgtactccagagattgtgtgcacaccctc
cactccagagaattgtggcttaaagaagcacgaactgtccgaatcggagaggagccattc
aagatggtgaagggcttctccaatcgttcaagaaaggccaggatgatgtctgagacaaag
gatgagaaggaccttcctctgtttggagaatggcaaactgaggagtaccagccacccata
gctgtggacgggaaggttcctcgtaatgaatacggtaacgtctacctttttaaagcctgc
atgatcccagtgggctgtgttcatgtcagactgcctaacctgcaccgtgtggcccggaag
ttgaacctcgatgctgtacctgcagttacaggcttcgactaccatggaggatattcacac
gctgtaactgatggttacatcgtgtgtgaagaagatgaggagattctcagagctgcctgg
gtggaagaacaggagattcagaaacagaaacagaaggagaaaaaggaaaagcgtgccatc
ggcaactgggctctgctggtgaagggactcttgattaaagagaggcttaaaaagcgttac
aacaagaagccccaggggttggggaaccttgcccatgaagatgatgctgggggtttttcg
tctgacgaggaggtggttgaaggtgacgcttccggagcgaagacggcatctgagaccctg
gcaatgtcttggccccaaaacagacaagctgaagaggaagacaggagcggaagcagaagc
aagaggaagacaacgagacgagggaagaagagtcaggagaaacatttattcccctttgag
aaagtttaa
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