Austrofundulus limnaeus (annual killifish): 106513340
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Entry
106513340 CDS
T06063
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106513340
03015 mRNA surveillance pathway
106513340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106513340
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106513340
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106513340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
106513340
NCBI-ProteinID:
XP_013857580
UniProt:
A0A2I4AQ14
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGSLQIKDKPEENGTVQNAAESTSAAVKPETEAESKPTDDD
DKDDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKYYPEVQLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNCKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSRENHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIERLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactcctgggcgcaggccgtggacgagcaagaagccgcggcggaatcgatc
ggtagccttcaaataaaagacaaaccagaagaaaatggaacagtacaaaacgctgctgag
tccaccagcgcwgcagtaaaaccagaaactgaagcagaaagcaaacctacagatgatgac
gacaaagacgacaaagcagcacagtcactgctgaacaagctgatacggaataatctcgtt
aatacaacaaatcaagtggaagttcttcagaaggaccccaactctccactttattctgtc
aaatcctttgaagaattacgtctcaaaccacaactgttacagggagtgtacgccatggga
ttcaatcgaccatctaaaatccaggaaactgccttacccatgatgttggctgagcctcca
cagaatctgatagcccagtctcagtcaggaacaggaaaaacggctgcctttgtcctggcc
atgcttagccacgtggaccccaacaacaaatatcctcagtgcctgtgcgtgtcaccaact
tatgaactggcacttcagactggtaaggtcatcgagcagatgggcaaatattatcctgaa
gtccagctagtctacgccattcgagggaacaaattgcagcggggcatgaagctacaggag
cagatagtcatcggcacacctggtaccatgttggactggtgcagcaaattcaagtttata
gaccctaagaagatcaaagtgtttgtgttggacgaggccgatgtcatgatcgccacacag
ggtcaccaggaccagagtatcagaatccagaggatgttgcctaaaaactgccagatgctg
ctcttctcagccacgttcgaagaaaccgtttggaactttgctcagcgcatcgtgccagat
cctaacatcattaagctgaagagagaggaggagacgctggacaccatcaaacagtactac
gtgttatgtaactgcaaggaggagaagttccaggctctctgtaacatctacggagccatc
accatcgctcaggctatgattttctgccacacaagaaaaactgcaggttggctcgcagga
gagctgtctagagaaaaccaccaggtagcgctgctgagtggagaaatgcaggtggagcag
agggccgccgtcattgaacgcttcagagatggaaaagagaaagtcctggtgaccacaaat
gtttgcgctcgaggcatcgatgtggagcaggtttccgtggtgatcaactttgacctgccc
gttgacaaagatggtaaccctgacaatgagacatacctgcacaggattggacgcacgggt
cgatttgggaaaaggggtctggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggagcatttcaataagaaaatcgaaagattagacacagatgatctg
gatgaaatagagaaaattgccagctaa
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