Austrofundulus limnaeus (annual killifish): 106513370
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Entry
106513370 CDS
T06063
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106513370
Membrane trafficking [BR:
alim04131
]
Endocytosis
Others
Others
106513370
Endosome - Lysosome transport
106513370
Endosome - Golgi transport
106513370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GbpC
Motif
Other DBs
NCBI-GeneID:
106513370
NCBI-ProteinID:
XP_013857621
UniProt:
A0A2I4AQ69
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MVLWTFWSVLLLSCVPFHSKSGAQAEITLSRSINRFCHLNVAPLEARFAKKPTGTKVARK
AENRDEVSNRFGTEAAATLKPSCSLQVKNKTVSRKETPVKANYSNDLEIPDKKCGNITAE
RAEATRTPERTFSVRRKRAKRSVGSAYNDNVDRSLSGEAQSPERSVESVQGAPKSRTEYR
RSGDEARGSSPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGAA
TESSLWRSTDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLISSDEG
ASFEKYPINFNVLSLLFHPAQENWILAYSHDNKVYSSMDFGRKWQLVHDNVMPGRFYWAV
MGLDRESDVVHIETRIAKGRAQYVKCRAQRCTEGNRQYLFPGHVDTNSLVVQDEYVFTQV
TKSGRATYFVSYMREPFKQMQLPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYISD
SPGVYFILSLENLRTSRGPAGNLLVDFYKVEGINGMYFANKLVDNHIKTFITYNKGQTWA
LLPAPASDVAGNNLHCILPFCSLHLHLEMSETPYASGPITSKKSVPGIIVATGNIGTELS
SSNLGMFMTSDAGNSWRQIFDEEYNVWFLDNGGALLAVLHAPTPIRHLWISLDEGKKWDR
HSFSLAPLFVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYMGLFSRRCMDGDYQTWH
LHNKGELCVMGEKQIYMKRRPGNRCMLAQDYSRLYSSEPCLCTAYDFECDYGWERQADGK
CSPAFWFNPNGAAKSCSSSQSFLNSTGYRKVLSNNCKERGWNVFSPKRVACRPRAPQGLR
LSTSSGELSATVGSNVTFMIYLTHGDSPSTSIQLDFGDGIKITYSNLSRTDDGIKHIYRM
TGIYRVTASADNSQGSDSSTLFLHITSPVERIYLSVPIVAVRGKAANLTVVVWPSHTRTL
TFFWWFDNSSEPIITLEGSISHMFHKEGTNKVTVQVACGSTVMQDSKVITVKEFFRSLLL
SFSPALDEHNPDIPEWREDIGRVVRTALSQVSGVPEDQLLVSLYPGLPTTAELFVLPDEQ
TSNEHKKRSEEALDTISDIFATALNQGLIQFELKTNVRIIVYMTQQTLAPLVDANSIHSG
SAMLMLLSVVIVGLAAFFIYKFKRKIPWIHVETEDPHEKDPEVISTVGQNDGMSKVKLSE
FPSQKELMEKELEGRNRGGFGRNMERIVTREFPNCTNV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggtactttggacattttggagcgttttgcttttgtcttgcgtcccttttcactccaag
tcaggggctcaagcggagataactttatccagatcaatcaacagattttgtcatctgaac
gtggctccgctcgaggcacgttttgccaaaaaaccaacggggaccaaagttgcgcgcaaa
gcagaaaacagagatgaagtttcaaacaggttcggaacggaggcagcagccactttaaag
ccgagctgttccctgcaagtgaagaataaaacagtgagcagaaaagagacaccggtcaaa
gcaaactattccaacgacctcgaaatacctgataaaaagtgtggsaacatcacagcggag
cgagccgaagcgaccagaacgccagaacgcacattttctgtcagaaggaagagggcgaaa
agaagcgtgggctcagcgtacaacgacaacgtggataggagtttaagtggagaggcgcag
tcacctgagaggtccgtggaaagtgtccaaggcgctcccaagtcgagaaccgagtaccgg
cgctcaggggatgaagcccgagggtcaagcccgaggcaaagtgagcctcacctggacacc
tcgacttttgccttgtcgggagactcggcgcacaaccaggcgatggtgcaytggtcyggc
cacaacagcagtgtgatcctgatcttgactaagctgtatgacttcaaccttggtgccgct
accgaaagctcgctctggaggtccactgattatggcagcacctacaccaaactcaatgac
aaagtgggttcaaggacagttttaagctacctctatgtctgccctaccaacaagcagaag
ataatgatgcttagtgacccagaggtagagagtgctgttctcatcagttcggatgaaggg
gccagcttcgagaaatatcccattaacttcaacgtcctgagcctcctcttccacccagca
caggagaactggattctggcttacagtcatgacaacaaggtatacagttctatggatttt
gggaggaaatggcagcttgttcatgataacgtgatgccaggcagattttattgggcsgta
atggggctggacagagaatcagatgtggtccacattgagacacgcatcgcaaaaggccgt
gctcagtatgtaaagtgcagagcccaaagatgcacagagggcaacagacagtacctcttt
cctggacatgtagacaccaactccctcgttgtacaggatgaatatgtttttacacaggta
accaagtcaggacgagccacttactttgtctcgtatatgagagaacctttcaagcagatg
caattaccaaaatactgtctgcctaaggacatgcatatcatcagcacagatgagaagcag
gtattcgctgccgtccaagagtggaatcagaacaacacttacagcctgtatatctccgac
tcccccggggtctactttatcctttcattagagaatctgagaaccagcagagggcccgct
ggtaacctactggttgacttttataaggtagaagggataaatggcatgtattttgccaac
aaactggtggataatcatattaagactttcatcacttacaacaagggacaaacctgggcc
ctactgccagcacctgcctctgatgtggctggaaacaacctgcactgcatactgccattt
tgttcgctgcatcttcatctggaaatgtcagagactccctacgcgtccggacccatcacc
agcaaaaagtcggtgccaggaatcatcgtggcaacaggaaatattggaactgagctgtcc
tccagcaaccttgggatgtttatgacatctgatgcaggaaacagctggagacagattttt
gatgaagaatacaacgtttggttcctagataacggcggggctttgctcgccgttctccat
gcaccgaccccgatccgacacctatggatcagtcttgatgaggggaaaaaatgggatcgc
cacagcttctccttggcacctctgtttgtggacggagttttaatggagccagaatctgac
aatcacattatcactttctttggacacttcagccatcggtcagaatggcagctgatcaag
attgactacatgggtctcttcagccggagatgcatggatggagattatcagacatggcat
ctgcacaacaagggagagctgtgtgtgatgggtgagaagcagatctatatgaagcgcagg
cctggcaaccgctgcatgttggctcaagactattccaggctctactcatcagagccgtgt
ctctgcacagcttatgattttgaatgtgattatgggtgggaacgccaggcggatgggaag
tgctctcctgctttctggtttaatccaaatggtgcggctaaaagctgcagctccagccaa
agctttcttaacagcaccgggtatcgtaaggttttatccaataactgtaaggagagagga
tggaatgtgttctcgcccaagagggtcgcgtgtcgccccagagcgccccaaggcctccga
ctgtccaccagcagcggagagctcagcgccaccgtcggaagcaacgttactttcatgatc
tacctcactcatggagactcgccgagcaccagcatccagttagacttcggggacggcatc
aagatcacgtactccaacctgagcaggaccgatgatggcatcaagcacatctacaggatg
actgggatttaccgagtgacagcttctgccgacaacagccagggatctgacagcagcacg
ctttttctacacatcaccagtccagtggagcgcatatatctgtccgtgcctattgtagcc
gtcagagggaaagcggctaatctgacggtggtagtttggccgagccacaccagaactctg
accttcttctggtggtttgacaacagctccgagcccattataactttggaaggaagcatc
tcccacatgtttcacaaggagggaacaaacaaggtcacggtccaggttgcctgtggaagc
accgtgatgcaggactcaaaagttataactgttaaagagttcttcaggtcgctgctgttg
tcgttttcaccggctcttgacgagcacaaccctgacatccccgagtggagggaggacata
ggccgtgtggtgcggacagctctgtcacaggtttctggcgttcctgaagatcagctgctc
gtgtctctctacccgggacttccaactacagccgagctctttgtcctgcctgatgagcag
acgtcaaatgagcacaaaaaaaggagcgaggaggcgttggatacaatatcagacattttt
gccactgcgctgaaccaaggcctcatccagtttgagctgaaaaccaatgttcgcattatt
gtgtacatgactcagcaaactttggcgccactcgtggacgccaactccatccacagcggg
tcggccatgctgatgctgctcagcgtggtaattgtcggtttagctgctttcttcatctac
aaattcaaaagaaaaatcccgtggattcatgtggagactgaggacccccatgagaaggat
ccggaggtgataagcacagtaggtcagaatgatggcatgtccaaggtcaagctaagcgag
tttccatctcagaaagaactgatggaaaaggagctggagggaaggaacaggggaggattt
ggaagaaatatggagagaattgtcacaagggaattcccaaactgtactaatgtctga
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