Austrofundulus limnaeus (annual killifish): 106513423
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Entry
106513423 CDS
T06063
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106513423
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106513423
NCBI-ProteinID:
XP_013857697
UniProt:
A0A2I4AQD8
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MAIKQMLRSEVQSQEFRAVLATSVQAERGLPGPKGDSGFPGNPGVPGPMGHPGPEGPKGQ
KGSQGEHGQEGATGVRGREGPPGPRGDPGPPGFGLKGARGDPGPSGPVGLAGEPGQKGAQ
GVPGSAGPPGQPGPQGFRGESGLPGAKGDRGLAGFQGLKGDVGLPGQPGIPGEKGAKGAM
GFSGQEGAKGSRGDQGPSGPPGLRGPVGPPGEAGLPGTIGLQGPPGIPGNPGQPGVKGEP
GVPGRIINAAGSTSVGIPGPPGPAGPPGPAGPPGLSGPIGPAGLPGSPGPKGDRGYKGDQ
GEPGIAVRTSQSISSSTAERQHSSSAHSELRGPPGPPGPPGRPGDSRQGPPGPPGPPGQP
GYGSLGPKGEKGDAGFSSSSGTFYTGPPGPPGLPGSKGSTGSPGPRGYPGDPGSPGVPGT
PGRPGFAEGGNVIAGPPGPPGPPGRPGLPGVKGDTGAPGIPGTSRGSVSVTAGPPGPPGP
PGPTGPTGPAGSFASSSEMRQYISDYLSRYRLSGMQGPPGPPGPPGLPGTFSGSMEDISA
RVVAYIQRSDSGLRIGVQGPPGPPGPASGSLTVSALIAMLQREDVRRYLAGPPGPQGPPG
PAGGLSGTYRIEEIATYIFNIMNERGIARGPPGPRGLPGPPGAPGAGFTTATIDYSALIK
NSDFRSWITSAVQQGPPGSPGVPGLPGPPGPQGPPGFSTATVFGSGGRGYSLEDIQRYLQ
ASGYRGQPGLPGPPGPPGPQGPPGTVTGSVSYSGNFPRESIHTEIQQYLTSDSVRRSIIG
PPGPPGPMGQKGERGEPGYSQSYIQSQSYTHGGSQYSAQRRETDVSKHTETMDYSNVAMK
VTDYIKNQGLLQQYLSEGPWRTSVRAIQGPPGPPGPPGPPGYSRVIGTYGNITADLMDFF
RTYGTIPGPPGNPGPKGDRGYPGPKGDKGDPGPPGLPGIPGSYTVQIPHRVQKREADNKV
GRHKRHRRQATGG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggccataaagcaaatgttgcgatctgaggtgcagtcccaggaattcagagctgttctt
gcaacctcagttcaggcagagagaggattgcctggacctaaaggtgattctggttttcct
ggaaatccaggtgtaccaggtccaatgggacatcctggccctgagggtccaaaaggacag
aaaggaagccaaggtgaacacggacaggagggggcaacgggtgtcaggggtcgtgagggt
ccacctgggcccagaggcgatccgggacctccaggttttggactgaaaggtgctcgcgga
gatcctggaccttctggacctgtgggacttgctggggagcctggacaaaaaggcgctcag
ggagttcctggatcagccggaccaccaggtcagccaggtcctcagggtttccgtggcgag
tctgggctacctggggctaaaggggacaggggtcttgctggatttcaaggactcaaaggt
gacgttggtttaccaggtcagccaggtataccaggagagaaaggcgccaaaggagctatg
ggattttctggacaagaaggagcaaaaggatcgagaggtgaccaaggaccttctgggcct
ccaggactcagaggtcctgttggacctcctggagaggctggacttccaggaaccattggg
cttcaaggaccaccaggaataccagggaatccaggccaacctggggtcaaaggtgaaccc
ggtgtaccagggagaatcatcaatgcagctggctccacctctgttggcatcccagggccg
cctgggcctgctggtccccctgggcctgctggacctccaggattatcaggtcccattggc
cctgctggtcttcctggctcacctggtcctaaaggagacagaggatacaagggagaccaa
ggagaacctggaatagcagtcaggaccagtcaaagtatatcctcctctacagcagagaga
cagcacagctccagtgcacactcagaactgcgtggcccaccgggtccacctgggcctcct
ggacgtccaggcgattcaagacagggccccccaggaccacctgggcctccaggccagcca
ggttatggaagtcttggacctaaaggagaaaagggagacgcaggtttttcgtccagctct
ggaacattttatactggaccaccaggacctcctgggcttcctgggtctaaaggatcaaca
ggttctcctggaccacgtggatacccaggtgacccaggctcaccaggtgtgcctgggact
ccaggaagaccgggattcgctgagggaggaaatgtgatcgctggaccaccaggtccacca
ggacctcctggacgaccaggactacctggagtcaaaggggacacaggagctcctgggatt
ccaggtacctcaagaggctcagtttcagtcaccgcaggccccccaggccctccaggtccc
cctggcccaactggccccactggccccgctggttctttcgcttcctctagtgagatgcgg
cagtacatcagtgactatctgagtagatacagacttagtggtatgcaaggtcctccaggc
ccacctgggcctccaggactccctggaaccttctcagggtcaatggaggacatctctgct
cgtgtcgttgcatacattcaacgatctgattcaggcctgagaattggtgttcagggccct
ccaggaccacctggccctgcctctggatccctgacggtcagtgctctcatcgccatgctt
cagagagaagatgtgagaagatatttggctggaccaccagggccacaagggcccccggga
ccagcaggaggactgtcgggcacttacagaatagaggagatagccacatacatctttaac
atcatgaacgagaggggcattgctagaggtccaccagggccacgaggtcttcctgggcct
cctggagctccaggtgcagggttcacaactgctacgattgactactctgccctgatcaaa
aattcagacttccgttcgtggatcacttctgctgtacaacaaggtcctcctggttctcca
ggtgttccagggctacctggccctcctggtcctcaggggcctccaggattctccactgcc
actgtgtttgggtcaggaggtcgtggctacagcctggaggatattcagcgttacctgcag
gcttcaggatacagaggtcaaccgggccttcctggtcctccgggtcctcctggtccacag
ggtccaccaggcaccgtcactggttcagtttcctacagtgggaacttccctcgagagagc
attcataccgaaattcagcagtatctgactagtgacagcgttcgacggtctattatcggc
cctccgggacctccaggtccaatgggtcagaagggggaacgtggagagcctggttactcc
cagagctacatacagagccaaagttacacacatggcggctcccaatacagcgctcagcgc
agagagactgatgtcagtaagcacacagagaccatggactactccaacgttgccatgaaa
gtcacagactacatcaagaatcaaggtctgctgcagcagtatctttcagagggaccatgg
aggacaagtgtcagagcaattcaaggcccccctggtccacccggccctcccggaccacct
ggttacagtcgcgtgatcggaacctatggaaatatcacagctgaccttatggacttcttc
aggacttacggcaccatccccggacctccaggaaatccaggaccaaaaggagacagaggg
tacccagggcctaaaggagacaagggggatcctggacctccaggtttacctggaatacca
ggatcgtacacggtccagattccacacagagtgcagaagagagaagcagataataaagtg
ggtcgtcataagcggcatcgtcgccaagccaccggtggatga
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