KEGG   Austrofundulus limnaeus (annual killifish): 106513625
Entry
106513625         CDS       T06063                                 
Symbol
ufd1l
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106513625 (ufd1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:alim03009]
    106513625 (ufd1l)
Ribosome biogenesis [BR:alim03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    106513625 (ufd1l)
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2
Other DBs
NCBI-GeneID: 106513625
NCBI-ProteinID: XP_013858004
UniProt: A0A2I4AR84
LinkDB
Position
Unknown
AA seq 311 aa
MFSFHHVFDHPMARGFQSRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL
NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMV
ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA
VSIIECDMNVDFDAPLGYKEPERRSQNKEEPTEEGGDTSSYADMDTGFRAFTGSGNRLDG
KTKGIEPSPAPLAASDIKRGIPNYDFKVGRITFIRNSKPQPRKIAEEDDTMNRFIAFSGE
GQSLRKKGRKP
NT seq 936 nt   +upstreamnt  +downstreamnt
atgttttccttccaccatgttttcgaccaccccatggcccggggctttcagagccgcttt
tccactcagtaccgctgctactcggtgtcwatgctggctggacccaacgaccgctccgat
gtagagaaaggaggcaaaattataatgccaccttcagctcttgatcagctaagcagactt
aacatcacctaccccatgttgtttaagctgaccaacaagaactcagacagaatgacacac
tgtggtgttctggagtttgtcgcagatgagggaatctgttaccttccacactggatgatg
cagaatcttctcctggaggagggtggtctggtccaagtggaaagtgtaaacctcatggtg
gccacctattcaaagttccagcctcaaagtccwgacttcctggacattacaaatcccaaa
gcagtcctcgagaatgcactgagaaattttgcatgcttgacaactggtgatgtcatagct
ataaactacaacgaaaagatctatgagctgcgagttatggagaccaaaccagataaagcc
gtatccatcatcgagtgtgatatgaaygtggattttgatgctcctttgggttacaaggag
cctgagcgacgatctcagaacaaggaagaaccaacagaggaagggggagacaccagcagt
tatgctgacatggacacaggattcagagcttttaccggctctgggaatcgcctggatggc
aaaacaaaagggattgagcccagccctgctcctcttgccgcaagtgacatcaaaagaggc
attccaaactacgactttaaagttggtcgratcaccttcatcagaaactccaaacctcag
cccagaaaaattgcggaagaagatgacaccatgaacagattcattgccttttctggagaa
ggacagtcattacgcaagaagggcagaaagccttga

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