Austrofundulus limnaeus (annual killifish): 106513747
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Entry
106513747 CDS
T06063
Symbol
smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106513747 (smarcad1)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106513747 (smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HHH_3
Motif
Other DBs
NCBI-GeneID:
106513747
NCBI-ProteinID:
XP_013858178
UniProt:
A0A2I4ARQ2
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSLFNLDRFRFMKKGANEEQVCGTKSPDSEKENKPDQMKTFKTPSKSHARGVVFDEVISI
DLEEDGVPHEPKKKTTPTRKFRSPSMKASRQAASDFTDDEDEMDENMNTLLEMFPQLTRT
XVLEVLRDTSTLDGAVAVCLLKFGDEEAQSKSRKRNQDESSCSQDSGEIQLSKKRRLSEA
SDEEENDREEPNCEKQEAMLKRLQRKFPTQKKEDLRMVLEEHEWNIEDVVQVLQLFADTE
KNSCLFNSEEQKSKRKDESSTNHKDSRDHKDDKDHGDQRESDADSSNDTDVTKDSEDDLM
DYKDDKDHEDHRESDANSSNDTDVTKDSEDDSDSEGSKCSKLKNNLSVRSAWIAKKSDSG
SSSSSVKPTSTSSYVAPSSSSSTSQTLSRFVSQTSIVKKQAAEIKMKARASHEPISSEGE
SDLEEDMVSSEFEDSDDELHVESGKPDLRKEMLTFFQNATIDELSLISGCSVKKAQRIVE
LRPYETWESLWDVFHKANGLSEDLLIGCKVVLKERKVVLGLMSKCQTISSKMVKRVTEVM
ESGTGSSKQPSILNNQFELKQYQLIGLKWLMLLHEHSLSGILADEMGLGKTIQAIAFLAQ
LYENGIHGPHLIIVPSSTLDNWVRELMAWCPSLEVLVYYGSVEERRYLKREILDEEVKFN
VIVTTYNLAIGNENDRSLFRKLPLKYAVFDEGHMLKNMKTLRYRHLMSINAEHRLLLTGT
PVQNNLLELMSLLNFIMPSMFSSSTLQLSKMFSMKSHEEQSSFERDRISQAKLIMKPFIL
RRVKSEVLKQLPAKEEKVEFCLMSEKQKVLYEALLKKLKTSTNGEKRELCNVMMQLRKMA
NHPLLHRQYYTTEKLETMSKLMLKEPTHVDASAALIQEDMAVMSDFELHRLCRQYSSIGS
YQLDNDLLLDSGKFHHLKELLCLLKSQGDRVVLFSQFTMMLDIVEVLLKHLQHRYVRLDG
STPIADRIVLIDQYNTDPEIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDR
CHRVGQTRTVQVIKLISKDSIEDCILQLGHKKLKLEQDMTAAEQGVEGTIPEDMASLLKA
SLGL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttaatttagaccggtttcgttttatgaagaagggagcaaacgaagagcaa
gtttgcggaaccaaaagtcctgattctgaaaaggagaataaaccagatcagatgaagacg
tttaaaacgccatctaagtcccatgcacgaggagtggtttttgacgaagtaatttccatc
gacttggaggaggatggagttccccatgaaccaaagaaaaaaacaaccccgaccaggaaa
tttaggagccctagtatgaaggcatccagacaggcagcatcagattttacagatgacgaa
gacgagatggatgaaaacatgaacacattactggagatgtttcctcagttgacaagaact
yatgttcttgaggtcctaagagatacaagcaccctggatggagctgtagctgtctgcctt
ttaaaatttggtgatgaagaagctcagagtaaaagcaggaagagaaatcaggatgaatcc
agctgttctcaggacagtggtgagattcagctgagcaagaaaaggagactatcagaggct
tcagatgaagaagaaaatgacagggaagaaccaaattgcgagaagcaggaggccatgctg
aagagactccaaagaaagtttcctacgcagaaaaaagaggatctgcgtatggtgcttgaa
gagcatgaatggaatattgaagatgttgtgcaggttctacagttgtttgcagacacagaa
aaaaattcctgcttatttaattcagaagaacagaaatcaaagagaaaagatgagtcaagt
acaaaccacaaagattctagggaccataaggatgacaaggatcacggagatcagagggag
tccgatgcagacagttcaaatgatacagatgttacaaaggacagtgaagatgatttgatg
gattataaggatgacaaggaccacgaagatcacagggaatccgatgcgaacagttcaaat
gatacagatgttacaaaggacagtgaagatgattcggattcagagggcagcaaatgttcc
aaattaaaaaataacctgtctgttcgttctgcatggattgcaaaaaaatctgattcaggc
tcttcatcttcctcggttaagccaacatctacctcttcctacgtggcaccgtcctcttcc
tcctcgacctctcagactttgtccagatttgtcagtcagaccagcattgttaagaagcag
gcagcggagataaagatgaaggcacgtgcctcacatgaacccatcagttctgaaggggaa
agtgatcttgaagaggacatggtatcaagcgagtttgaggattccgacgatgagttacat
gttgaaagtggaaaaccagatttaaggaaagagatgctcacatttttccagaatgcaact
atagatgagctgtctttgatttctggctgttctgtaaaaaaagcccagaggattgtggaa
ctgaggccttatgaaacatgggaaagcctgtgggatgtctttcataaggcaaatgggctt
tcagaagatttgctgataggatgcaaagttgtcctcaaagagcgaaaggtcgtcttagga
ctcatgtctaaatgtcagacaatttcttccaaaatggtgaaacgggttactgaagtgatg
gaaagtggaacaggatcctcaaaacagcccagtatactcaacaaccagtttgaacttaaa
cagtatcaactaatcggtctgaagtggctgatgctcctgcatgaacacagtctgagtggt
atccttgcagatgagatgggtttgggaaaaactatccaggctatagcatttttggctcag
ctatatgaaaatggaattcatggtcctcatcttatcattgtgccttcctctacactggat
aactgggttagagagctgatggcgtggtgtccaagccttgaagtccttgtttattatggg
tctgttgaagagcgtcgctacctcaaacgtgagatccttgatgaggaagttaagttcaac
gttattgtgaccacgtataacttggctattggaaacgaaaacgaccgcagccttttccgc
aagctgcctctaaagtatgctgtgtttgatgaaggccacatgttgaagaacatgaaaact
ttgcgctaccgtcaccttatgtctattaatgctgaacatcggctgctgctgacaggaacg
cctgtacagaacaaccttctagagctcatgtctttgctgaacttcatcatgccctccatg
ttctccagctccactctgcagctctccaaaatgttttccatgaaatctcatgaggagcaa
agcagttttgagagggatcgtatttctcaggccaaactcatcatgaaaccatttatcctg
cgacgagttaagagtgaggtcctcaagcagctgccggctaaagaagaaaaagttgagttc
tgcttaatgagtgagaaacagaaggttctctacgaggccctcctaaaaaaactgaaaact
tccactaatggagagaagcgtgagctgtgtaatgttatgatgcagttgaggaagatggcc
aaccatcctcttcttcatagacaatactacaccacagaaaagcttgaaaccatgagcaaa
cttatgctcaaggaaccaacacacgttgatgccagtgctgctctgattcaagaagacatg
gcagtgatgtcagactttgagctgcatcgcctgtgtcgacagtactcctccatcggctcc
taccagctcgataacgatcttttgcttgactcagggaaattccaccaccttaaagagctg
ctgtgcttgctaaaaagccagggagaccgagtggtgttgttcagccagtttaccatgatg
ttagatattgtggaagtgcttctgaaacatcttcagcatcgttatgtcaggctggatgga
tccacacctatagctgacaggattgtgttgattgatcagtacaacaccgaccctgagata
tttgtgtttctgctgtcaacccgtgctggtgggctcggtatcaacctcacctcagcaaat
gttgtcatcctgcatgatatcgactgcaatccctacaacgacaaacaagctgaggataga
tgtcaccgtgtgggtcagaccaggactgtacaggtgatcaagctcatcagtaaggacagc
atcgaggactgtatcctgcagctcggtcacaaaaaactcaagttagaacaagacatgact
gctgctgaacaaggtgttgaggggaccatacctgaagacatggcatctttgctcaaagcc
tctctgggactgtga
DBGET
integrated database retrieval system
