Austrofundulus limnaeus (annual killifish): 106513990
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Entry
106513990 CDS
T06063
Symbol
cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106513990 (cdh16)
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Major cadherins
106513990 (cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Big_9
Cadherin_4
InlK_D3
Protocadherin
He_PIG
Motif
Other DBs
NCBI-GeneID:
106513990
NCBI-ProteinID:
XP_013858514
UniProt:
A0A2I4ASP4
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAERKAAPTLITALILSTFQTFMPGSSVNVKIGVPENYDGIFPWYLSKLHNLPSNSTDLV
LTGDDEGIFGVDAQFLYAIKPLDREKQPSYSLQVSFRPSDVPQNIRSPVHRQSFTVEVFV
IDKNDNVPTFIEQSMRGSVQLGLLKGIPFMQVEALDRDDRNTAHAELRFSLMEQTPRIPS
SQMFFINSITGEVSLTDEGSSTLDPEMCGRYKLLVMVKDMAGKVNAFFTTGTVTVEVTGN
TWASPDPVRLQENLPGPYPIPISQVKWSGSQAVYSLDGEFPEMLFTISREGVIYLNAPLD
RETQDQFHISIVVERPDGRQIAKPVELRVMVGDANDNRPTFPQAQYHTVVKELAARGTEI
LTVQAADNDDPKTDNVRIFYRLVGQIPESPRALFRVDRDSGVISVQADSMEGTAPQYTLT
ITAEDAKGLNSSCTVVVTVQDENNNPPVFSQHEYGPFHVPEDAPVGTTVAAVVARDADVR
GGDSWXVDYCLESGNEEEVFMLATDRQTNEVSLVLTKVLDFERESEYILVLSAQNPVALV
RGRYGPASTATVTIYVDDMNEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYS
LQGDTKKYFSIGKYSGELKTVQALDREENSTYTMEVIAVDGRNSSLSASTLVTVHILDVN
DNSPVLVGDYSWKYLCTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRLNWKLTPI
NDTHTNLSLNIPYLPPEVYMVPFTISDSSSPPRSTFINLPVTVCPCNIRGNCKIPAKPLE
GMPTIQSAVGILLGTFAVIGIILIVVFVRLSYQDPKQETKTNQERVPHDHYR
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggctgagagaaaggcagcaccgacgctcatcacggcactcatactgtcaacgttccag
acttttatgccgggctcttcggtaaacgttaaaattggtgttccagaaaactacgatggt
attttcccatggtatctatccaagcttcataacctgcccagtaactccactgacctggtg
ctaacaggagatgatgaaggaatatttggagtcgatgctcagttcctgtacgccatcaaa
ccactggacagagagaaacagccttcctactctctgcaggtttccttcagaccgtcagac
gttcctcagaacatcaggtcaccggtgcaccgtcagagcttcacggttgaagtgttcgtc
atcgacaagaacgacaacgtgcccactttcatcgagcagagcatgagaggcagcgtgcag
ctcggcttactcaaagggatcccgttcatgcaggtggaggctctggaccgggacgaccgg
aacaccgcccatgccgagctgcgcttcagtctgatggagcaaacacccaggatcccctcc
agccagatgttcttcatcaactccatcaccggagaggtttctctcactgacgaaggatcc
tcgactctggatccagagatgtgcgggcgctacaagctcctggtgatggtgaaagacatg
gctgggaaggtgaatgcttttttcacsacgggcacggtgaccgttgaggttactggaaac
acctgggcttcacctgatcccgtgaggcttcaggagaacctcccaggtccttaccccatc
cccatctcacaggtcaaatggagcgggagtcaggcggtgtacagtctggatggagagttt
ccagagatgctcttcaccatcagcagagaaggtgtcatttatctcaacgcacctctggac
agagagacacaagaccagttccatatcagtattgtggtggagcgtccagatggcagacag
atagcgaagccagtggagctgagggtgatggtgggcgacgccaatgacaatagacccacc
tttccacaagcacagtaccacaccgtggtcaaggagctggcagctcgagggacagaaatt
ctgacggttcaggcagccgacaacgatgatccaaagactgacaacgtgcggatcttctac
cgtttagttggacagatcccagaaagtcctcgtgcccttttcagagtggaccgggactct
ggcgttatctctgtccaggcagacagcatggaggggacagcacctcagtacaccctgacc
atcactgctgaggacgccaaaggtctgaacagttcctgcacggtggtggtgacggtgcag
gacgaaaacaacaacccaccggttttctcccaacatgagtacggcccgttccacgttcca
gaggacgctccagtaggcaccacggtggcagctgtggttgcgagggatgcagatgttcga
gggggagacagctggcwggtggactattgtttggagtctgggaacgaggaggaggtcttc
atgttggcgacggaccggcagaccaatgaagtctcgctcgtgctcacgaaggtgttagac
tttgagagggaaagcgagtacatcctggtgctcagcgcccagaacccagtcgctctggtc
cgtggccggtacggccctgcatccacagcgacggtcaccatctatgtcgacgacatgaac
gagggtccaattctgtctcagagtcattatgaggtgacggtcagagaaggggaggaaccg
ggacgggtcatcgccaccattcgaggctacgaccccgattctcaccccatcaggtattct
cttcaaggggacaccaagaaatacttctccataggaaagtattctggtgaactaaagacc
gttcaggcgttggacagagaggagaacagcacctacaccatggaggtcatcgcagtggac
ggacgaaactcctccttatctgcatccaccctggtgacggtccacatcctggatgtgaac
gacaacagcccagttctggtcggggattattcctggaagtatctgtgcacgccaaggtgg
gaggaccaggccttggtgctggcctcacgggacagcgatgggccgcagcatggagggaga
ctcaacttctcccttcgcagtgatgccacggttcgacttaactggaaactgacgcctatt
aacgatactcacaccaacttgtcgttaaacatcccctacctgccgcccgaggtttacatg
gtgccttttaccatctctgatagcagctctccacccagaagcaccttcataaacctgcca
gtgacagtgtgcccttgcaacatcagagggaactgcaagatacctgccaaaccgttggag
ggcatgccaacgatccagtctgcagtggggatcctgcttggcacctttgctgtcatcggg
atcatcctcattgttgtctttgtgagactgtcctaccaagaccccaaacaggaaaccaaa
actaaccaggagagagttccacatgatcattacagatga
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