Austrofundulus limnaeus (annual killifish): 106514151
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Entry
106514151 CDS
T06063
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106514151 (trpc4)
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106514151 (trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
106514151
NCBI-ProteinID:
XP_013858734
UniProt:
A0A2I4ATC2
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSLLEKAYLGAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDVNLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCIFIGLLYPMFALCYLIAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYNGTKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKAADERGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDPDHQFTE
FIGATMFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKSFWYLICWIKRQVCKRTRSKRPESFGTLGRRAAENVRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEDNFKELKQDISSFRYEVMGMMKAGKPALQAAKASCSSVESS
LAYPNASLKLSSCPLSSQTKSKLNRFKMTTSILKQSGSSSSLRPPESSNGLPNGLVVSDE
SCCETSSQCRDPSTDLSDFGLYQKHHWSSKEAASGSGEILREMYSLSEEAGESESSGAEE
QSKEVTARANVEKELPGNKLIEESPENTKETNXNHSLDEFREKQTTEEDKDSPGSXSDMD
RNPSGSHRDEEDVKTHNQK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactacaggcggactgacagctcatcataccgggaccgcatcccgttg
agaattgtgcgggctgagtcggagctatcgcttttggagaaagcctacctgggagccgtg
gagaagggggactatgctagcgtcaaaaaagctctggaggaggcagaaatctacttcaag
atcaacatcaactgcatcgaccccctcggccgcacggctctgctcatcgccattgagaac
gagaacctggagatcattgagctcctgctgagcttcagcgtctacgtcggcgatgccctg
ytgcacgccatccgcaaggaggtggtgggagccgtggagctgctgctcaatcacaagaag
ccaagtgggggcatgcaggtcccccctattttattggacaagcagttttctgacttcacc
cctgacatcactcccatcattctcgctgcacacaccaacaactatgaaattatcaagctc
ctggtgcagaaaggtgtgtctatgccacagccgcatgaggtgcgctgcaactgtgtcgag
tgtgtgtccagctcagacgtggacagcttgcggcactcgcgctctcgcctcaacatctac
aaagcgctgtcgagcccctcgctaattgcgctctccagcgaggaccccttcctcaccgca
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagtttaaatctgag
tacgaggagctttctcagcagtgtaaacaattcgccaaggacctcctggaccagacgagg
agctccagagagctcgagatgatcctcaactacagagacgatgtcaacctgttggaagag
gaaggcaacaacgacctcgcaaggctcaaactggcaatcaagtaccatcaaaaagagttt
gtcgctcaaccaaactgccagcagcttctggcatccaggtggtacgacgagtttccgggt
tggaggcggcgtcactgggcgggaaaattcatcacctgcatcttcatcggcctcctctac
cccatgttcgccctctgctacctcatcgcgcctaaaagccgctacggcctcttcatccgc
aagccgttcatcaagttcatctgccacacggcttcctacctgacctttctgttcctgctg
cttctcgcctcccagcacattgtcaccacggaacaggacaggcaggacaggcagggcccc
gcaccgaccaccgtggagtggatgatactgccatgggtgctgggattcatctgggcagag
attaagcaaatgtgggacggtggtttccaagattacgttcatgactggtggaacctgatg
gactttgtcatgaactcactatacctggccactatatctctcaagattgtagcctacact
aagtacaacggcaccaagcccaggaaccagtgggaaatgtggcaccctactttagttgct
gaggcagtgtttgccatagcaaacatyttcagctccctgcgcctcatctcactcttcaca
gccaactctcatctggggccgctgcagatctcactcgggcgaatgctgctggacatcctg
aagttcctcttcatttactgtctggttctgttggcttttgctaacgggctgaaccagctg
tacttttactacgaaacaaaggctgcagatgagagagggaagtgcaagggcatccgctgt
gtcgagcagaataacgccttctccacgttatttgagaccctacaatctcttttctggtca
atctttggactgatcagcctgtacgtgaccaacgtggatccagaccaccagttcactgaa
tttatcggcgccaccatgtttggcacgtacaacgtcatttcattggtggtgctcctcaac
atgcttatagccatgatgaacaactcctaccagcacattgctgaccacgcagacatcgag
tggaagtttgccaggacaaagctgtggatgagttactttgaggaaggggccactcttcca
gcccctttcaacattatccccagccccaaatccttctggtacctcatatgttggatcaag
agacaagtgtgtaagaggacacgatccaaacgcccagaaagttttggaactcttggaagg
cgagcagcagagaatgtgaggataaaccatcagtatcaggaggttttaaggaacctggtg
aaacgttacgtggctgcgatgatcagagatgccaagacagaggaaggcctgactgaagac
aacttcaaggagctgaagcaggatatctccagttttcgttacgaggtgatgggcatgatg
aaggcagggaagcctgctctacaggctgccaaggccagctgcagctctgtggaatccagt
ctcgcttaccccaacgcctcgctcaagctctcctcctgccctctgagcagccagacraaa
agcaaactcaaccgtttcaagatgaccacgtccattctcaagcagagcggctcctcgtct
tcactgaggcccccagaatcgtccaacggtcttcctaatggactcgtggtctcggatgag
agctgctgcgaaacatcaagccagtgcagggacccctccacagatcttagtgactttggt
ttgtaccagaaacaccactggagcagcaaggaagctgcatcgggctcaggagagatttta
agagagatgtactctttgtcagaggaagcaggggagtcggagagctcaggcgcagaagag
cagagcaaagaggtgacggctcgagcaaatgtcgagaaagaactcccggggaataaatta
atagaagaatccccagaaaacacaaaagagactaatrtcaatcacagcctggatgaattt
agagaaaaacaaaccacagaagaggacaaagactcgcctggctctscctctgacatggat
agaaatccatcagggtcacacagagatgaagaagatgtgaaaacccataatcaaaagtga
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