Austrofundulus limnaeus (annual killifish): 106514173
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Entry
106514173 CDS
T06063
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106514173 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106514173 (pds5b)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106514173 (pds5b)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
106514173 (pds5b)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
106514173 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
TPR_Vitellogenin
EnP1_C
Motif
Other DBs
NCBI-GeneID:
106514173
NCBI-ProteinID:
XP_013858769
UniProt:
A0A2I4ATD7
LinkDB
All DBs
Position
Unknown
AA seq
1404 aa
AA seq
DB search
MAHSKARATDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFMRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNIVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPYNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRHHVKDLLDLIKKPKVPSEASNKAVFSKVMVITRNLPD
PGKAQDFVKKLAQVLDDDERIRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFL
EMVKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSF
THPVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGGKMEESFPHIKSVLLPVLQAKA
KRGPPRQAKYSIHCINAMFTNRDTHFAQIFEPLHKSLDPANLEQLITPLTTLGHLAQLAP
EQFAAPLKSLVANFIVKDLLMNDRTPGKKTTKLWVSDDEVSPETMAKIQGIKLMVRWLLG
VKNNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEI
ITLEQYQLCALVINDECYQVRQCFAQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHA
RQCLVKNVNIRREYLKQHAAISDKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIK
EALWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQATSDPKTNEKLYTVCDVAMNIIMS
KSTTYSLESPKDPVLPSRFFTKPDKNFSNTKNYLPPEMKAFFSPGKPKSANVLGAVNKPL
TSAGKQLQSKASRMETTSNDSSSNPGSPQRSKTRHDSTEMDHSENEDISLKRADSIDKDI
EKPRGRKRGMTSSDDQDSKPKRGRKRASVGTPAAPDSEDQWDEDARPEDEQNSPPKKGRR
GRPPKSAAANQDTPAKGRRGRKKAAPPPEEDDEEEEEEEDERGDEEAEEEDDDDKSSENM
EVKTKGGRQVRAPRRSQGSSESAESTPQKRRGRPPKSAQPAAKKPARGGRSKAAAVKDDS
DEEEEEQEDEPTPRGRKKAAGRRR
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccacagatgggaaggtgacctacccaccgggggtcaag
gagatctccgacaaaatctctaaagaggaaatggtccgcaggctcaagatggttgtgaag
accttcatggacatggaccaagactctgaggaagaaaaggagctttatctgaacctagcc
cttcacctggcctcagactttttcctcaaacacccagacaaagacgtgcgtctgttagtg
gcctgctgtcttgcagatatattcaggatttatgctccggaggcaccttacacctctcca
gataaactaaaggatattttcatgtttataacgcgacagctgaaaggactggaggatacg
aaaagcgcacagttcaacagatatttctacctgctggagaacatagcctgggtgaagtcc
tacaatatttgtttcgagcttgaagacagcaacgagatattcacccagctttaccgaaca
ctcttccaggtcataaacaatggccacaaccagaaagtgcacatgcacatggtggacctg
atgagctccatcatctgcgagggagacaccgtatcgcaggagctgttggacacggtttta
gtcaacctggtgcctgcacacaagaatttgaataaacaagcttatgacctggccaaagct
ctgctgaagaggactgctcaagctattgaaccttacatcaccaacttcttcaaccaggtg
ctgatgctgggaaagacctcagtcagcgatctgtctgagcacgtttttgacctcatcttg
gagctttacaacatagacagccacctgcttctgtcagtgttgccacagctggagtttaaa
ctcaagagtaatgataatgacgagaggctgcaggtggtgaagctgctcgctaaaatgttt
ggagccaaggactctgagctggctgcgcagaacaaaccgctctggcagtgttacctgggc
aggtttaatgacatccatgtgcctatcagactggagtgtgtaaagtttgcaagtcattgt
ctcatgaaccacccagacctggcaaaagacctcacagagttcatgagggtccgatcacat
gacccagaggaggctatccgccatgatgtcattgtctccatagtaactgctgctaagaaa
gacttgtcccttgtaaatgatgctttgcttaatattgtaaaggagaggaccttagacaag
cgatggcgagtacgtaaggaggctatgatgggcctggcatctatctataggaagtactcc
ctgcagggcgagggcgggagggaagcctctaaacagatttcctggatcaaagacaaactg
cttcatatctactaccagaacagcatcgacgacaggttgctggtggagcgagtttttgcc
cagtacatggttccttacaacctggaaaccactgagagaatgaagtgtctgtactacctg
tacgctacgttagacacaaacgctgtcaaagctttaaatgagatgtggaagtgccagaac
atgctgaggcatcatgtcaaagacctgctggacctgatcaaaaaacccaaggtaccttct
gaagcatccaacaaagctgtattttccaaagtcatggtgatcacaaggaacctgccagat
ccgggcaaagctcaggactttgtgaagaagctcgctcaggtcctggatgatgatgagcgg
atcagagatcagttggaaaccttggtcagccccagctgctcctgtaagcaggctgaagtc
tgtgtgcgagacatcactaaaaagctcggcagccccaaacaacccagcaaccctttcctg
gaaatggtgaagttccttttggagaggatcgctcctgtgcacatcgacacagagtccatc
agtgctctgataaaacaagtaaacaagtctattgatggaacagccgacgatgaggaggag
ggggttcccactgaggaggccatcagagcaggactggaactgttgaaggtgctgtccttt
acacacccggtgtcattccactctgcagagacgttcgagtctttgttgggctgcctgaag
atggacgatgagaaagtggccgaggcggctctgcagattttcaagaacaccggcggcaag
atggaggagagtttccctcacatcaagtctgttttactgccagtactgcaagccaaagct
aagagaggcccccctcgtcaggccaagtactccatccactgcatcaacgccatgttcacc
aacagagacacacactttgctcaaatctttgagcctctgcacaaaagtctggaccctgct
aacctggagcagctcatcactcctctcaccaccctgggtcacttggcccagctggcccca
gaacagttcgccgctccactgaagtcgctcgtcgccaacttcatcgttaaggatctgctc
atgaacgacaggacccctggcaagaagacaaccaaactttgggtttctgatgatgaagtg
tctccagaaactatggctaagatccagggcataaagctgatggtcaggtggctgctgggg
gtgaagaacaaccagagtaaatcaggaaactccaccctgaggatgctgactgccatcctc
cacagtgatggagacctgactgagcagggcaggatgggtaaacctgacatgtcgaggctg
cggctggcagcagcgtgcgcgctccttaagctggcacaggagccctgctaccatgaaatc
atcactctggagcaatatcagctgtgtgctctcgtcatcaacgacgagtgctaccaggtg
cgtcagtgtttcgcccagaagctccatcgaggtctgtgccgcctccgtctgccgctggag
tacatggcggtgttcgctctgtgcgccaaagatcccgtgaaggagaggagggctcacgct
cgccagtgcctggtgaaaaatgtcaacatacgccgagagtatctcaaacagcacgcagcc
atcagcgacaagctgttgtctctgctgcccgagtacgtggttccctacaccatccacctt
ctggcacacgacccagattatgtgaaagtgcaggacatcgagcagctgaaagagatcaaa
gaagctttgtggttcgtcctcgagatcatcatggccaagaatgaaaacaacagccacgcc
tttataagaaagatggttgaaaatatcaaacagacaaaagacgcccaggccaccagcgac
cccaaaactaacgagaaactgtacacggtgtgtgacgtagccatgaacatcatcatgtca
aagagcaccacctacagcctcgagtcccccaaagaccccgtgctgccgtcacgcttcttc
accaaaccagacaagaatttcagcaacactaaaaattatctcccaccagagatgaaagca
ttcttctcaccaggaaagcccaagtcggctaatgttttgggtgcggtgaacaagccgctg
acctcagcaggtaaacagctgcagagtaaagcctcacgtatggagaccaccagtaacgac
tcttcgtccaacccggggtccccacaacgcagcaagaccagacatgacagcacagaaatg
gatcacagtgaaaacgaggacatcagtctaaagagagcagacagcattgacaaggatatt
gaaaagccccgcggccgcaaacgtggcatgacctccagcgacgaccaggacagcaagccg
aagcgcgggcgcaagagggcgtcggtcggcacgcccgcggcgcccgactccgaggaccag
tgggacgaggacgcgcggcccgaggacgagcagaacagcccgcccaaaaagggacgccgc
ggccggcccccaaagtccgccgccgccaaccaggacacgcccgccaaagggaggaggggc
cgcaaaaaggccgccccgccacccgaggaagacgacgaagaggaggaggaggaggaagac
gagaggggggacgaggaggcagaggaggaggacgacgacgacaagagcagcgaaaacatg
gaggtgaagactaaaggagggaggcaagtcagagcaccacggcgatcacagggcagctcc
gagtcagcagagtccacgccacagaagaggagaggacgtccacccaaatcagctcaacct
gcagccaagaaaccagcgcgcggcggacgatcgaaagccgccgccgttaaagacgactcg
gacgaagaagaggaggagcaggaagatgagccaacaccaaggggtcgtaagaaggcagct
gggcgcagaagatga
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integrated database retrieval system
