Austrofundulus limnaeus (annual killifish): 106514364
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Entry
106514364 CDS
T06063
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04260
Cardiac muscle contraction
alim04261
Adrenergic signaling in cardiomyocytes
alim04814
Motor proteins
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106514364 (tpm1)
04820 Cytoskeleton in muscle cells
106514364 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106514364 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
106514364 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106514364 (tpm1)
04147 Exosome [BR:
alim04147
]
106514364 (tpm1)
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
106514364 (tpm1)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of microglial cells
106514364 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
DUF745
ATG16
DUF3450
Lebercilin
ERM_helical
CENP-F_leu_zip
Laminin_I
TMF_DNA_bd
PUMA_CC
SlyX
DUF1664
DUF16
Fez1
EzrA
TMP_N
Motif
Other DBs
NCBI-GeneID:
106514364
NCBI-ProteinID:
XP_013859039
UniProt:
A0A2I4AU79
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEIQLKEAKNIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSESKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggcagagtcagacaagaaagcagcagaggacagaagcaaacagcttgag
gacgacttggtggctctgcagaagaagctgaaaggaaccgaggatgagctggacaagtac
tccgaggctcttaaagacgcccaggagaaacttgagctggctgagaagaaagccaccgat
gctgagggagatgtcgcctccctgaacagacgtatccagctggttgaggaggagttggat
cgcgctcaggagcgtctggccacagccctgcagaagctggaggaggctgagaaggctgct
gacgagagcgagagaggcatgaaggttattgagaacagagccatgaaggacgaggagaag
atggagatccaggagatccagctcaaagaggccaaaaacatcgctgaggaggctgaccgc
aaatatgaggaggtggcccgtaaactggtcatcattgagggtgacctggaacgtacagag
gagcgcgccgagctgtcagaaagcaaatgctctgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaagacaag
tatgaggaggagatcaaggtcctcaccgacaagctgaaggaggctgagacccgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccatcgacgacttggaagacgagctg
tactcccagaaactcaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacttccatataa
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