Austrofundulus limnaeus (annual killifish): 106514366
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Entry
106514366 CDS
T06063
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106514366 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alim03310
]
106514366 (rora)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106514366 (rora)
Nuclear receptors [BR:
alim03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106514366 (rora)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106514366
NCBI-ProteinID:
XP_013859053
UniProt:
A0A2I4AU91
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Position
Unknown
AA seq
520 aa
AA seq
DB search
MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAAPVRKQTCSSTNRGISVTKKT
HTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRN
RCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLT
PSYSLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEP
ICDFAPGSGFFPYCSFTNGEISPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAF
LQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEV
VFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALF
SAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSR
HTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagtccccgccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagcggcg
ccggttcggaagcagacctgctcgagcaccaacagaggaatctcggtaacaaagaagaca
cacacttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatc
cattacggtgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagc
aatgcagcttactcctgcccccgtcagaaaaactgcttgatcgaccgcaccagccgcaac
cgctgccagcactgccggctgcagaagtgcctggcagtgggaatgtcacgagatgcggtg
aagttcggccgcatgtcaaagaagcagcgggacagcctgtacgccgaggtccagaagcac
cggctgcagcagcagcagcgcgaccaccagcagcagcccggagaagcggagccgctcacg
cccagctacagcctctcggccaacggcctcacggagctccacgatgacctcagcggctac
atggacggccacacccccgacggcagcaaacccgactcggcggtcagcagcttctatctg
gacatccagccgtctccagaccagtccggcttggacatcaacggcatcaagcccgagccc
atctgcgactttgcccccggctctggcttcttcccctactgctccttcaccaacggagag
atctcccccaccgtctccatggctgagctagagcacctggcccagaacatctccaagtcg
cacatggagacgtgtcagtacctgagagaagagctgcagcagatgacctggcaggctttc
cttcaggaggaggtggagagctaccagagcaagccgcgggaagtcatgtggcagctgtgt
gctatcaaaataacagaggccattcagtatgtggtggagttcgccaagcgcatcgacggc
ttcatggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctctggaagtt
gtgtttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatgga
aaatatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtc
ttcgagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttc
tctgcctttgtgttgatgtctgctgaccgatcctggctccaggagaaagtgaaagtggaa
aaactccagcagaagatccagctggctcttcagcacgttttgcaaaagaaccacagagag
gatggtatacttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtagg
catacagagaagctcacggctttcaaagcaatatacccagacattgtgcgtgcccacttc
ccccccttatataaggagctgttcggatcagactttgagcagtccatgcccgtcgacggg
tag
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