KEGG   Austrofundulus limnaeus (annual killifish): 106514548
Entry
106514548         CDS       T06063                                 
Name
(RefSeq) roquin-2-like isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:alim03000]
    106514548
   04121 Ubiquitin system [BR:alim04121]
    106514548
Transcription factors [BR:alim03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    106514548
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106514548
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-CCCH zf-RING_2 zf-CCCH_4 zf_CCCH_4 zf-C3HC4_4 zf-C3HC4 zf-RING_4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 106514548
NCBI-ProteinID: XP_013859310
UniProt: A0A2I4AUZ3
LinkDB
Position
Unknown
AA seq 1154 aa
MPVQAAQWTDFLSCPICYNEFDSSGHQPVSLGCSHTVCKTCLHKLHRKACPFDQTPIGTD
IDLLPVNCALLQLVGXQVPDVQPVSLDSAADVEHYEVCRLCVEELALYLKPISSTKGGAN
LSPSALSRPMQRKLVTLVNCQLVEEEGRVRAVRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAVVVPSTPPTPPKSPSAMQEDALKLVLLALEDGSALSRKVLVLFVV
QKLEARFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQI
VHIAMEAGLRISPEQWSSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDP
ANLTSLRPHLELLANIDHNPDAPAPSWGELEDVMLAVKLVVHGLVEFIQNFSKKSHDAPQ
PQANSKYKTSMCRDLRQQGGCPRGTNCTFAHTQDELEKFRLKNKKSSSSSSSSSVVRSFP
PASKGLKDPTETTASVAEEVSCLTHSQLISRGLGTMEEVKRAMASGTSRANGSNGLPGTN
RISSGSAEQKSVSPARTPVSHPSALSASSPAGGADGASLPRHGQFVLSSPHPSQASELYY
QDPHPAYDTAHYQPTSGSYYPPALHPTHKPCMARFPRSSNVPESSLPPSVVLSPSSYPND
PQTPHPPSSSSSSGYPPHPHRDRMGPPAFHPHPGQPQYGPLGPGHSVYAPLYDSRRVWRP
QLYHREDARSNSLPLEVLHSSVYQPPLRERFNSLDNYCSGAEHRAGLHRDYGRVPLGYED
LYRRKQDQWTPIHHHHNPSRPSQSSPIFTDFGAEHMESSGGQCAGCRFRDEESLAHYSPW
SCGTAGPCLSPFEPEALTHTAAHSCSERPGKLLTRLKELDGPEGEAGGRKQWLQTLDPYR
RLKDEDPIIPFSEAPIISKWGAISRAARTGYHTTDPIQATACQGSASTTPINFKDYNHHL
DHGDYRWSSRGSDSSSQSSFYESEHLCASELDGCRTSISGEEKPGSELQTRQSAYSQDQN
QAEREPDTDRDIELDLRVLDMEDSHTCELKSQESLDLPSPPSQDASHLLPPCSSPLRSSP
VEEHLQTKGLITEKMDAHLLKKMAFRKSLSPVGLTSGGLGIRKLVLQTGPPRLGDTSTRA
CPETPGTEMLLNES
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgccagtgcaggcggcccagtggacagacttcctgtcctgtcccatctgctacaatgag
ttcgacagcagcggccaccagcccgtcagcctgggctgctcccacaccgtgtgcaagacg
tgcctgcacaagctgcaccgcaaggcctgccccttcgaccagacgcccatcggcaccgac
atcgacctgctgcccgtcaactgcgccctgctgcagctggtcggcgygcaggtcccagat
gttcagcctgtgagcctggacagcgccgcagatgttgagcactacgaggtctgcaggctg
tgcgtggaagagctggctctctacctgaaacccatcagcagcacgaaaggtggggcgaac
ctgagtcccagcgcgctgagccggcccatgcagaggaagctggtgaccctggtgaactgc
cagctggtggaggaggagggccgggtgcgggcggtccgcgcagcccgctctctgggggag
cggacggtaacggagctcatcctgcagcaccaaaacccccagcagctctcggccaacctc
tgggcggcggtgagggcgcgcggctgccagtttctgggacctgctgtcgtcgttccctcc
actccccccacacccccaaaatccccctcagctatgcaagaagacgcgctgaagctggtt
ctgctggctctggaggacggctcggccctgtccaggaaggtcctggtgctgtttgtcgtc
cagaagctggaggctcggttccctcaggcgtccaaaaccagcatcggccacgtggtgcag
ctgctctacagggcctcctgcttcaaggtgacgaagcgcgacgaggactcctcgctcatg
cagctgaaggaggagttccggacgtacgaggcgctgaggagggagcacgacgcccagatc
gtccacatcgccatggaggcgggccttcgaatctcacctgagcagtggtcctccctgctg
tatggagacctggtccacaagtcacatatgcagtccatcattgacaagttgcagtctcca
gaatcattcgccaaaagcgtccaggagctgacaattgttctgcagaggacaggagacccg
gctaacctcacaagccttcgaccccacttagagctactggccaacatagaccacaaccct
gatgctcccgctccatcgtggggagagctggaagacgtgatgctggcggtgaagctggtg
gttcacggactggttgaattcatacagaacttcagcaagaagagtcacgacgctccgcag
cctcaggccaacagcaagtacaagaccagcatgtgcagagaccttcgtcagcagggaggc
tgtccgcgaggaaccaactgtacatttgctcacacgcaagatgagctggagaaatttaga
ttaaagaacaagaagagcagcagcagcagcagcagcagcagcgtggtccgctctttccct
ccagccagcaaaggccttaaagacccaacggagaccactgcctccgtggcggaggaagtt
tcctgcctgactcactcgcagctgatctccagagggctgggcaccatggaggaagtcaag
agagccatggccagtggaaccagcagggctaacgggtccaacgggctccctggtaccaac
agaatctcatcagggtcagcggagcagaagtccgtttctcctgccaggactccagtgagc
cacccctcggctctgtctgcctcgagtccagccggtggtgcagacggtgcttctttaccc
agacacggtcagtttgttctgtcctcaccacatccctctcaggcttcagagctgtactac
caggacccccaccctgcttacgacacggcccactatcaaccgacctcaggttcctactac
ccacctgctcttcatcccactcacaaaccgtgtatggctcgtttccctcgatcctccaat
gtcccagaatcctctcttccgccatccgtggtcctttcgccatcttcttacccgaacgac
cctcagacaccgcatcctccgtcttcgtcatcttcctcggggtatccgccacacccgcac
agagatcggatgggaccgcccgcctttcacccccacccgggccagcctcagtatggaccc
ttgggccctggtcacagtgtttatgctcctctctacgacagcaggagagtctggagacct
cagctgtaccacagagaggatgccaggagtaactcgctgcctctagaggtgctgcattcc
tccgtctaccagcctccactcagggagagattcaactctctggacaactactgttcagga
gccgagcaccgggccggcctgcacagggactacggccgcgttcctctcggctacgaggat
ctgtacagacggaagcaggaccagtggactcctattcaccaccaccacaatcccagcaga
ccctcccagtcctcacccatcttcactgacttcggagcggagcacatggagagcagtgga
ggtcagtgtgccggatgccggttccgagatgaggaaagcttggcccactactctccgtgg
tcttgtgggaccgccgggccctgcctgagtccctttgagcccgaagctctgacacacaca
gcagctcactcctgctcggagcgtccgggaaagctcctcacacggctgaaggagctggac
ggtcccgaaggagaagcgggaggcaggaagcagtggctgcaaacgctggatccctacaga
cgtttgaaggacgaggatccgatcattccctttagcgaagcgcctattatctcaaagtgg
ggcgccatttccagggcggcccgcaccgggtaccacaccaccgatcccatccaagccaca
gcctgccagggcagcgccagcaccacacccatcaactttaaagattacaaccatcatttg
gatcacggtgactacaggtggagctccagaggatctgactcctccagtcaatccagtttc
tatgagagtgagcatctttgtgcgtcggagctggacggctgtcggacttccataagcggc
gaagaaaaacccggatctgagctgcaaactcgtcagagcgcctacagccaggaccagaac
caggctgagagagagccggacacggatcgagacattgagcttgacctgcgggttttagac
atggaggattcacacacctgtgagctcaagtctcaggagtctttagatctgcccagccca
ccatctcaggacgcctcccacctcctccctccctgctcatctcccctccgctcctcccct
gtagaggagcacctccagaccaaaggactcatcacagagaagatggatgctcacctgctg
aaaaagatggctttcaggaagtctctgtctccagtagggctgacgtcaggaggtctgggc
atcaggaagctggtgctgcaaaccggacctcctcgactgggcgacacttcaaccagagct
tgtcctgagacrcccgggacagagatgttgctcaacgaaagctga

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