Austrofundulus limnaeus (annual killifish): 106514587
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Entry
106514587 CDS
T06063
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alim03016
]
106514587 (pus1)
Enzymes [BR:
alim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106514587 (pus1)
Transfer RNA biogenesis [BR:
alim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106514587 (pus1)
Prokaryotic type
106514587 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
SNaCT13
Motif
Other DBs
NCBI-GeneID:
106514587
NCBI-ProteinID:
XP_013859364
UniProt:
A0A2I4AV52
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MIKVRQVLSSVKYRQTLKANGWLFKVLSMMSNETTAAQLLKRPNDGDQIDSVEKVTKRVK
TDEEHTEDAKKIKKRKVVLLMAYSGKGYFGMQRNLGNAQFKTIEDDLVSALIKSGCIPES
HGDEMKKMSFQRCARTDKNVSAAGQVVSLKLQLIDDLIKNINEHLPPQIRVLGVKRVTQG
FDSRIKCDARTYSYMLPTVAFAPKDYDTGNIEGFRLEPETLRRVNSLFAVYKGTHNFHNF
TSGKTSDDPSARRYIMEMSCGEPFVRNNYEFAVITVRGQSFMQHQIRKMIGLVIAVIKGY
ATEEMMEQCWEHEKADIPKAPGLGLVLEKVHFDLYNKRFGGDGLHERLEWDHLEEEIKAF
KEAHIYPTIIEMECQEGSMISWMATLPKHSFDSSSTKTQDDESQKQDPADEGKDSD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagtccgacaagtgttgagttcagttaagtaccgacagacgctaaaggcaaac
ggttggctttttaaagtcttgtccatgatgagtaatgaaaccacagctgctcaactgcta
aaaagaccaaatgatggggatcaaatcgattctgttgagaaagtcaccaaaagagtaaaa
acggatgaagaacacactgaagatgccaagaaaatcaagaaaaggaaagtggttctgctg
atggcctactccgggaagggatattttggcatgcagaggaatctgggaaacgcccagttt
aagaccatcgaggatgatctggtctcagctcttataaaatctggctgcatccctgaaagt
catggtgatgagatgaagaagatgtctttccaaagatgtgccaggacagataaaaatgtt
tctgctgctggtcaagtggtttctctgaagctgcagctgatcgatgacctaataaaaaat
ataaatgaacatttgccgccacagatcagggttcttggagttaagcgagtgacccagggt
tttgattccagaatcaaatgcgatgctcgcacatattcctacatgcttccaactgtggcc
tttgctcctaaagactatgatactgggaatatagaaggctttcggctggaaccagagaca
cttcggagggtaaacagtctttttgctgtctataaaggcactcataacttccacaacttc
acctccgggaagacttcagatgaccccagtgcccgccgctacatcatggagatgtcctgt
ggagagccttttgtccgcaacaattatgagttcgccgtgatcaccgtgcgaggccagagt
tttatgcagcaccaaattcgtaagatgattggcctggtgattgccgtgatcaagggctat
gcaacagaagagatgatggagcaatgctgggagcacgaaaaggcggatattcccaaagct
ccgggactcgggctggtcctcgaaaaggttcacttcgacctgtacaacaaacgcttcgga
ggggacggtctgcatgagcggctagaatgggaccacttggaggaggaaatcaaggccttc
aaagaggctcacatttaccccaccattattgagatggagtgtcaggagggctccatgatc
agctggatggccacgcttcccaaacacagctttgattcatcatctaccaaaacacaagat
gatgagagtcaaaaacaggaccctgccgacgaggggaaggactctgattaa
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