Austrofundulus limnaeus (annual killifish): 106514682
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Entry
106514682 CDS
T06063
Symbol
cnot8
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106514682 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106514682 (cnot8)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106514682 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106514682 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
106514682
NCBI-ProteinID:
XP_013859534
UniProt:
A0A2I4AVL4
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MPAALQDSSQIICDVWASNVEEEMRKIRQVIQSYNXVAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPNTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEHD
FFQILNLFFPAIYDVKYLMKSCKSLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQPQNGLSSSGPEETNNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagcacttcaggactccagtcagatcatctgtgaygtctgggcgagcaacgtg
gaggaggagatgaggaagatccggcaggtcattcagagctacaactargtggccatggac
acggagttccccggggtggtggtgcgaccgatcggggagtttcgcagcacggtggactac
cagtaccagctgctccggtgcaacgtggacctrctgaagatcatccagctgggcctgacg
ttcatgaacgaggacggggactatcctccgaacacgaccacgtggcagttcaacttcaag
ttcaacctgacagaggacatgtactcgcaggactccatagacctgctgcagaactcgggc
ctgcagtttaaaaaacacgaagaggaaggcatcgacacgctttactttgctgagctcctc
atgacctcgggcctggtgctgtgtgaaaacgtcaagtggctctccttccacagtggctac
gacttcggctacctggtgaagctcctgacggacgctcggcttcctgaagaggagcacgac
ttctttcagatcctcaacctgttctttcctgccatctacgacgtcaaatacttgatgaag
agttgtaagagtttaaagggtgggctgcaggaagtagcggaccagctggagttgaagcgg
atcggacggcagcatcaggctggatcagactcgttgctcacagggatggctttcttcagg
atgaaagagttgttttttgaagacaacatcgatgatgcaaagtactgtggcagactctac
ggcctgggctcgggctccagccaaccccagaacggcctgtccagttcgggaccagaggag
accaacaacaagcactga
DBGET
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