Austrofundulus limnaeus (annual killifish): 106514746
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Entry
106514746 CDS
T06063
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106514746 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106514746 (gli1)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
106514746 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
106514746
NCBI-ProteinID:
XP_013859613
UniProt:
A0A2I4AVU5
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MPVDMQPHQGLYYYDNSSSQPSRGLVPSDQSPYSDVSSLRAPLLDGPPQDCHAMYNPMTP
SMTHGSGSGPGQGNGHCLNQYMRPPQAPPAHSMISHRGMPATEGCNSAPYCNQNMMSSHH
NFCHVQPGSEHIEPGDGSRFSTPRSTLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVA
FVNSRCNPNGASSYGHLSVSAMSPSLSYSSNINCHPRPGSMYGGNGGTPLGGHTPAPCQA
SRLPPHNPRLQAPPKHGHLKTEPGLGGVMDGMNVKSLEERSEADVASPSSTGTQQDHLMG
LLDGRDDLDKEDGKHEPEAIYETNCRWESCNKEFDTQDQLVHHINNEHIHGEKKEFVCHW
QECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYV
CEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAH
ITKKHRGDTGPRAPGSAMTPGGPSSELLLEKEEARREDCKLLAPETALKSQPSPGGQSSC
SSERSPLGSTNNNDSGVEMNLNAAGSLDDLTALEDGVAGGGGGGGGGGEPGTMGMSAQAL
KRLENLKIDKLKQIRRPTPPGRCTSNKLPAIPGSGENMGMCAPSPLLSNRRVMELSSHEL
GVGTGSSNDRRGSGTSSLSSAYTVSRRSSMASPYPSSRRSSEVSQMGGTAGGGCHLLSPE
HTGGEPLSPESDRRGAPCPVGGLPGLPNLTPAQHYKLKAKYAAATGGPPPTPLPNMEQSG
APVRRGGILSDYQGQHLPPFLQQGGPRRHSANTEYGTGVIYPHQAPGNNFRRASDPVRSA
ADSQALPKRFNSLNNVAMMGRRNALQHHGSDLSLARHMYSPRPPSITENVMMEAMGMEPH
LAPVETSDRSMMIAPGGRNFMNYQQPNQTIGGGVPLANQLSPRHNSLGGPDHGYIHRTYQ
GGEVISRANGNLLEQARPEGMSNTLLQQAEYSMSTCQLSPSGPHYPSLGQSGNSGGPWNG
THNQMLTSSHNFQNQQSMQYSDPSLQPQQTRAHFSNQTGLYNNTNGTQKLVIKPEQQFHS
GMGGAGSCQSAKLHQQQMFLQQTQGYPQQLGQGAMRSSGQPSCDFQRPNQNCFSGGGGVS
LGCARSTLSDDQRSETPMMQVKEMMVRNYVQSQQALMWEQQQEQPQSGIKPAPVSDNMDL
SVQTAIMQHSPEHQNQNLYSSQAYSSYPDQNLVMSPAAHSQGSIPDTTKAQHLAGLQGSC
HNQEMVVPRPPQGQKPLSRQNSLSQVGGGFIGSSPHLSPVHFTSSPRRGVRLPPVQHPQH
PQNEMFSPSNNNNMYYTGQISMEKHMDPQNGPCLNQQNSIGSSLDPAGDAKSAPLAPYPE
SVPVSNALENLDLDNARIDFTSIIDDANSSSFSPVNNPLQEHLGSSSQASSRLTTPQTSV
SLAPGSALSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacatcaggggctgtattactacgacaactcctccagtcag
ccctccagaggcctagtcccgtcagaccagtccccctacagcgatgtgtcttcactgcga
gccccgctccttgacggtcctccccaggactgccacgccatgtataatcccatgactccc
agcatgactcatggatcaggatcaggaccagggcaggggaacggccactgcttgaaccaa
tatatgagaccacctcaggccccaccagcccacagtatgataagccacagggggatgccg
gccacagagggttgcaacagcgccccctactgtaaccagaacatgatgtcgtctcatcat
aacttctgccacgttcagcccggctctgaacacatcgagcctggcgacggctcgaggttc
tccacgcctcgctccacgctgaagttgagtaaaaagcgagctctgtccatctcaccttta
tctgacgccagcgtggacctgcagaccgtcattcggacctctcctaactcattagtggcc
ttcgtcaactcgcgctgcaaccccaacggcgccagctcctacggccacctctctgtgagc
gctatgagcccatcgctgagttattccagcaacataaactgccacccaagaccagggtcc
atgtatggaggaaatgggggtacacctctgggcggccacacacccgctccctgccaagcc
tctcgtttacctccccacaatcctcggctgcaggctccacccaaacatggacacctgaaa
acagagccagggttgggaggagtgatggacggcatgaacgtgaagagcctggaggagagg
tcagaggcagatgtagccagtccttcgtccactggaactcagcaggatcatctgatgggg
ctcctggacggcagagatgacttggacaaggaggacgggaagcacgagccagaagccatt
tatgagaccaactgtcgctgggagagctgcaacaaggagtttgacacgcaagaccagcta
gttcatcacatcaacaacgagcacatccacggagagaaaaaggagtttgtgtgtcactgg
caggagtgctcccgagaacagagacccttcaaagcccagtacatgctggtggttcacatg
cggcgacacacaggagagaagccacacaagtgcacttttgaaggctgtaataaggcctac
tctcgcctggagaacttaaaaacccacctacgctctcacaccggcgagaaaccgtacgtg
tgtgagcacgagggctgcaacaaagccttctccaacgcttcggacagagctaaacatcag
aaccggactcattccaatgagaaaccttatgtttgtaaaatacccggttgcactaagcga
tacacagacccgagctctctacggaaacatgtaaagacggtacacggccctgaggcccac
atcaccaaaaagcatcgtggggacacggggcctcgagcccctggctcagctatgaccccc
ggaggcccgagctctgagctgctgctggagaaagaggaggcacgcagggaggactgcaaa
ctgttggccccagagaccgctctgaagtcgcagccgagccccggcggtcagtcgtcctgc
agcagtgaacgttctcctttggggagcaccaacaacaacgacagcggtgtggaaatgaac
ctgaatgcagcgggcagcttggacgacctcactgcattagaagatggagttgcaggagga
ggaggaggaggaggtggaggaggcgagcctggaacaatgggaatgtctgcacaagctctg
aagaggctggagaacctaaagatcgacaagctgaagcaaattcgtaggccaactcctcct
ggccgctgtaccagcaacaagcttccggccatccctggttcaggagagaacatgggcatg
tgtgcgccgtctccacttctctctaatcgtcgcgttatggagttgtccagccacgagctc
ggagtcggaaccggctcctcgaacgacaggagaggaagcggcacgagcagcttgagctct
gcgtacaccgtgagccgccgctcctccatggcgtccccttacccgtccagccgacggtcc
agcgaggtctcgcaaatgggagggacagcagggggagggtgccacctcctgagccccgaa
cacaccgggggggaacccctctcacccgagagcgaccgcagaggagctccgtgtcccgtc
ggagggttgccaggtctccccaatttaacgcccgctcagcactacaaactaaaggccaaa
tacgccgcagccaccggcggaccaccgcccactcctttgcctaatatggagcagtcaggt
gcaccagtcagaagagggggcattttaagtgactaccaagggcaacacctgcctcctttt
ctgcagcaaggtggtccccgaaggcacagtgccaacacagaatatggtactggtgttatc
taccctcaccaggctccgggtaacaacttcaggcgagccagtgatccggtgagatcagcc
gcagattcacaagccctccccaaacgcttcaacagccttaacaatgtagccatgatgggc
cgcaggaacgcgctgcaacaccacggctctgaccttagccttgctcgtcacatgtactct
ccccgtccgcctagcatcacagagaacgtcatgatggaagccatgggtatggagccccac
ctcgcccctgttgagacgagtgaccgttccatgatgattgcccctggagggagaaacttc
atgaactaccaacaaccgaatcagaccattggaggtggagttcctctcgcaaaccagctg
tccccgagacacaattctcttggtggccctgatcatggttacattcaccggacctaccag
ggaggcgaggtcatttccagggctaatggaaatctgttggagcaggcaaggcctgagggt
atgtcaaatacacttctccaacaggccgagtacagcatgagcacctgtcagctcagtcct
tcaggcccacattatcccagcttaggtcagagcggcaactctggaggaccttggaatggt
acccacaaccaaatgctgacgtccagccacaattttcaaaaccagcaatcgatgcagtac
tcagatcccagtctgcagcctcagcagacacgagcccacttcagcaaccagaccggtctc
tacaacaacacaaatggaactcagaagctcgttatcaaacccgagcagcagttccactcc
ggcatgggcggagcaggttcctgtcaaagcgctaagctccaccagcaacaaatgttcctg
caacaaacacaggggtacccccaacagctgggccagggagcgatgaggagctccggccaa
cccagctgcgactttcaacggccgaatcaaaactgtttctccggtggaggaggggtgagc
ttgggctgtgcgcgctccacgctgtctgatgaccagaggtccgaaacgccaatgatgcag
gtgaaagagatgatggtgaggaattacgtgcagtcccagcaagccctcatgtgggagcag
caacaagagcagcctcaaagtggaatcaaaccagcgcctgtttccgacaatatggatctg
agtgttcagacagcaattatgcaacacagtccagagcaccagaaccagaacctgtactcc
agccaggcttattcctcttatcctgaccagaatctggtcatgagccctgctgcccacagt
caaggctccatcccagatacaacgaaagcccaacatctagcaggtctccagggttcttgc
cataatcaggaaatggtggtacccagaccccctcagggacagaagcccctcagtcggcag
aacagcctgtcacaagtcggaggaggctttatcggcagctcgccccacctcagccccgtc
cacttcacgtctagcccgagacgaggggttcgacttcctccggtgcagcatccgcagcac
cctcaaaatgagatgttctctccgtcgaacaacaacaacatgtactacacgggtcagatc
agtatggagaaacacatggacccccagaacgggccgtgccttaaccagcagaacagtatc
ggttcaagcctggatccagccggcgacgcaaagtcggcccccctggctccctaccccgag
tctgttcctgtttcaaacgccttagagaacctggacttggacaacgctcgcatagacttc
acatccatcattgatgacgccaactcctcctcattcagtccggtcaataatccccttcag
gaacatttgggatccagttcccaggcctcctcccgcctcaccaccccacagacctcggtc
agcctcgctccaggctcggctctgtccaacatggctgtgggtgacatgacatccatgctt
acctcactggctggggagaataagtacctgaacactttgtcttag
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integrated database retrieval system
