Austrofundulus limnaeus (annual killifish): 106514836
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Entry
106514836 CDS
T06063
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim02010
ABC transporters
alim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106514836
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106514836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alim02000
]
106514836
Transporters [BR:
alim02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106514836
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
106514836
NCBI-ProteinID:
XP_013859741
UniProt:
A0A2I4AW75
LinkDB
All DBs
Position
Unknown
AA seq
1985 aa
AA seq
DB search
MALMRTATTSALPVIEEVVRLQNSMVFKAANSLDFQDDVMGSINMLLCGTKADNNSTKMS
FSLQSPKQMAKNMSVSNVGNNSSDFCQTLIDSLQGTPSLRYIWSTFRPLLRGKVLYAPDT
PAARLLVKEANSTFNSLAMLKELADSWDELGPRVWNFMQNSPQVNTFRALLANPIFAEAL
NQRLSGTGWTAELLGNFLYNGPPEDRPARMPPYDWRNVYXTTTETLKLLSKFLGCLDLNK
FEGVETESHLVKKALEHLNNDTFWAGVVFENLQPSSSLIPPFVKYKIRMDIDEVERTNKV
KSRSWSPGAKDNAFNDLRYIWGGFAYLQDMMDHAIIRLHTSKTQPLGVFVQQIPYPCFVD
DAFVQSIGTVLPMFLVLAFMDSVCMTIKSLVLEKELRLKEVLRAVGIRNGALWSARFTEN
IVLLSIPCALMSIMIKYGKVLQYSDPSVIFVFLLVFCLATISQCFFISVFFSKANLAAAC
GGLIYFLLYLPHVLCYAWRDVMGFGAKVAVSLLSCVAFGYGCEKFSKYEEQGIGIQWHNI
GQSPEEGDRYTFIVSIVMMLLDAFLYWVLTWYIENVFPGQYGIPKPWYFPFTSSYWCGTA
SSTEHNPDLLLDSSVSDEYMEKPPPNIKAGVSIRKLVKIYKTGKKLAVDGLSLDFYQNQI
TSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIRTDMDIIRLHLGMCPQHNVLFNEL
TVEEHIYFYARLKGRSKSEVKSEMDQMIKDVGLPHKRKELAKNLSGGMQRKLSVAIAFVG
GSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEADILGDRIAIISHGKL
RCCGSSLFLKKCFGSGYYLTLVRSGTEKMANQRQNVTQKHAFEEETERDCPSRSSLDDGF
GSQTWDNSDPTDLTAVTQLVRXHVPEAVFLESIGQEITFILPYSGARDGTFAALFQKLDL
AXVDLGLTSYGISDTSLEEIFLKVAEDTGVDAEIPAAKEPLVRDWKRSSRESRRNSIASV
XHKTEQNGMSDLKERFSSKVEDCKKSASVNGRGSTVIIGWKLIRRQFLALFVKRFHHARR
SRKGLIAQVVLPAFFVCLSLIFSLIVPPFADYPSLELQPWMYGLPQTTFYSNDMKENVEV
SKVVETLVNNPGFGTRCMNGDPIPKLPCSSGGSNWFTPAVDQSVLDIFLNGNWSMSNPSP
SCQCSTPKRTIMLPDCPLGAGGLPPPQRVQNTTDTLLNLTGRNMTDFLVKTFEHFGKKRY
GGISVGGINSQVRLTEPEIKGVFRDFKDIFNSSQDNVTDQTFQRVETLLKNLGTRDNVKV
WFYNQAWHSIVSFLSVANNGILRGNLPVEQNPRQYGISISNHPLNLTKEQLSFAAMATTS
TDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPAVYWLANFAWDMCNYIV
PCFIVIVIFLSFQQKAYVSPANLPALILLLIFYGWAITPMMYPASFLFSVPSTAYVVLTC
VNLFIGINGSVATFIMELFDDDNVKNINNIVKQVLLIFPHFCLGRGLIDMATNQAMATLF
INFGEDRFKNPLSWEMVGKNLCAMSIQGFVMFTFTILIQYKFFCKPRLISVQPPSEEEED
VDVARERRRVYEGNAKKDLVAIYDLTKVYPRKSTPAVDRLCVGVPAAECFGLLGINGAGK
TTTFKMLTGDIPVSSGEAFLNGYSIRTEMRYVHQNMGYCPQFDAINDLLTGREHLEFYGR
LRGVPEKEVATVAEWGIQKLGLVKYANKSAGTYSGGNKRKLSTAIALIGCPPVIFLDEPT
TGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGCFKCLGSIQHLK
NRFGDGYTVIVRVAGSPPELKPVEDFIRQTFPGSVLKESHHNTLQYQLPHAPGALANIFS
HFTRHQQRLNLEDYSVSQTTLDQVFVNFARHQHDEEDPQGHSNPVDISDELPLQAVQTSK
EEKMV
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggccctaatgaggacagccacgaccagtgcattaccagtaattgaggaggtggtccgg
ctgcaaaactccatggtcttcaaggcagctaattccttggatttccaagacgacgtgatg
ggaagcatcaacatgttgctgtgtggaacaaaggctgacaacaactccaccaaaatgtcc
ttcagtctacagtcgccaaaacagatggctaagaatatgtctgtttcaaacgtgggcaac
aattctagtgatttttgtcagactcttatcgactccctgcagggcacacctagtctgcgc
tacatttggagcaccttcagaccattacttcgagggaaggtcctgtacgcgcctgataca
cctgccgctcgccttctggtcaaagaagcgaatagcacattcaactccctggctatgcta
aaagagctcgcagattcatgggatgaactcgggccacgtgtttggaacttcatgcaaaac
agccctcaagtcaacaccttccgggctttgctggcaaatcccatctttgctgaagccctc
aaccagcgcctcagcggtacsggatggacggccgagctgctggggaacttcctgtacaac
ggacctcctgaagaccgtccagctcggatgccgccttacgactggaggaatgtttacarc
accaccaccgaaaccttgaagctcctctccaaattcctcggttgtttggatctgaataag
ttcgagggagttgagactgaaagccatctagtgaagaaagccttggagcatctaaataat
gacacgttttgggctggtgttgtctttgagaacctccagccgagctccagcctcatccct
ccttttgtcaaatacaaaatcaggatggacatcgatgaagttgagcgtaccaacaaagta
aaatcaaggtcctggtcccctggagccaaagacaatgccttcaatgatctgcgctacata
tggggaggctttgcttatctccaggacatgatggaccacgccattattcgcttgcacaca
tcaaagactcaacctcttggtgtttttgttcagcagatcccatatccttgctttgtggat
gatgcctttgttcagagtatcggaacggttctccccatgttcctggtcctggccttcatg
gactccgtgtgcatgaccatcaaaagcttggtgctggagaaggagctgcggctcaaggag
gtgctgcgagccgttggcattcgaaacggcgccctgtggtccgccaggttcacagagaac
attgttcttctcagcattccctgtgcgctcatgagtatcatgattaagtacggcaaagtg
ctccagtacagcgacccctctgtaatctttgtcttcctgctggtgttctgcctggccacc
atctctcagtgcttcttcattagcgtcttcttctcaaaggccaacctagcagcggcgtgc
ggtggcctcatctactttctcctctacctgccgcacgtcctctgctacgcctggagggac
gtcatgggtttcggggccaaggtcgccgtgagtttgctgtcgtgcgtggccttcggctac
ggctgtgagaaattttccaagtatgaggagcaaggcatcgggattcagtggcacaacatc
ggccagagtccagaagagggagatcgctacaccttcattgtgtccatcgtcatgatgctc
cttgatgcttttctatactgggtgctcacatggtacattgaaaacgtctttccaggtcaa
tatggaattcctaaaccatggtacttcccwttcacttcctcatattggtgtggaacggca
tcatcaacagaacataaccctgatctgctgctagactccagtgtcagtgatgaatatatg
gagaaaccgccccccaacataaaagcaggggtctcaattcgcaagcttgtcaaaatctac
aagactgggaagaagcttgcagtggatgggctgagcctggacttctatcagaatcagatt
acatcatttcttggccacaacggagcaggaaaaacaaccacaatgtccatcctaacggga
ctgttcccgcctacatcaggaacggccctcatcaatggatatgacattcgaaccgacatg
gacatcatccggttgcacttgggaatgtgtccacagcataatgtcttatttaatgaattg
actgtagaggagcacatttacttctatgctcggctgaaaggacgcagcaagagcgaagtg
aaatccgagatggaccagatgattaaagatgttggtttaccacayaagaggaaggaactc
gctaagaacctgtcaggtggcatgcagcgaaagctctctgtggccatagcttttgtaggt
ggttcaaaaatcgtaatcttggatgagcctacggcaggggtggatccctacgctcgtaga
gggatctgggagctgctgttaaagtacaaacaaggtcgcaccatcattttgtcaacccac
catatggacgaggcagacatcttaggggatcgcattgccatcatctcccacggcaagctg
cgttgctgtggctcctcccttttcttgaagaagtgctttggtagcggctattatctaact
ctggtcaggagcggaactgaaaagatggcaaatcagcggcagaatgttactcagaaacat
gccttcgaggaagaaacggagagagactgtccttccaggagcagtctagatgatggcttt
ggcagtcaaacctgggacaactcggatccgacagatttgacagctgtgactcagctcgtg
cggygccacgtccccgaggctgtctttttggagagcatcggtcaggaaatcactttcata
ctgccctacagcggagccagagacggaacgtttgctgcgctcttccaaaagctcgacctg
gctrtggtcgaccttggcctgaccagctacggtatctctgacacctcgctggaggagata
tttcttaaagtggcagaagacacaggagtggatgcagaaataccagcagcaaaggagccg
ttggtgagagactggaagagaagctcccgcgaatccaggagaaacagcatcgccagtgtc
sgccataaaacagagcagaacgggatgagtgatttaaaggaaaggttttccagtaaagtc
gaagattgtaagaaaagtgcgagcgtcaatggaagaggatccacggtcatcatcgggtgg
aagctgatcagaaggcagtttctagcgctctttgtcaagcgcttccaccacgcccggagg
agccgcaagggactcattgcccaggtggtcctgccggctttcttcgtgtgcctgtctcta
atcttctccctcatcgtcccgccgttcgccgactacccgagtctggagctgcagccgtgg
atgtacggcctgcctcaaaccaccttttacagcaatgacatgaaagagaatgtagaggtg
tccaaggtggtggaaacattggtgaacaaccctggttttgggacacgttgcatgaacgga
gatccgataccaaagttaccatgctcctctggcgggtctaattggttcactcccgccgtg
gatcagtcggttcttgacatcttcctcaacgggaactggagcatgtccaacccctcccct
tcctgtcagtgcagcactccgaaaaggaccatcatgttacccgactgtccgctcggcgca
ggcggtcttcccccaccgcagagggttcagaacaccacagacactctgttgaatctgact
ggacgaaacatgacagacttcttggtyaagacttttgaacattttggtaaaaaaaggtac
ggggggatctctgttggaggaatcaactcacaagtccgactgacagagcctgagatcaaa
ggagttttcagagattttaaagatattttcaattcatctcaggataacgttactgatcag
acgttccagagggtcgagacgctgctgaagaacctgggaaccagggacaatgtcaaggtg
tggttctacaaccaggcatggcacagtatagtgtccttcctaagcgtggcaaacaacggc
atcctgagaggaaatttgcccgtggaacagaacccacgccaatatggcatctccatctcc
aatcacccccttaacctcaccaaggagcagctctcctttgcagccatggccacgacctcc
actgacgtggtggtgtccatctgcgttattttcgccatgtccttcatccctgccagcttc
gtcctctttctcatccaagagagggtgagcaaagccaagcatctgcaatttgtcagcgga
gtcaacccggccgtctactggttagccaactttgcctgggacatgtgtaactacatcgtc
ccttgtttcatcgtgattgtgatcttcctctccttccaacaaaaggcctatgtctcgcct
gctaacctccccgccttgattctgctgcttattttttacgggtgggccattactcccatg
atgtatcccgcctccttcctcttcagcgtgcccagtacggcctacgtggttctgacctgc
gtcaacctcttcatcggtattaacggcagcgtggccactttcatcatggagctctttgat
gatgacaatgtcaaaaacatcaacaacatagtgaagcaggtgctgctgattttcccgcat
ttctgtttgggcagagggttgattgacatggctacgaaccaggcgatggcaacgctcttc
atcaattttggggaagaccgttttaagaacccactgagctgggaaatggtggggaaaaac
ctctgcgctatgtccatccagggatttgtgatgttcacctttacaatcctcatccagtat
aagttcttctgcaaaccaagactcatatccgtacagccaccatctgaggaggaagaggat
gttgatgttgcccgggagcgtaggagggtgtacgaaggcaacgctaagaaagacctcgta
gccatctatgacctcactaaggtataccctcggaagagcacccctgccgtggacaggcta
tgtgtgggcgtacctgctgcagagtgttttggtttgctggggatcaacggagctgggaaa
accacaacgttcaagatgctgacaggagacatcccggtctccagcggagaggccttccta
aacggctacagcatacgaacagaaatgaggtacgttcaccagaacatgggctactgtccr
cagtttgatgccatcaatgatctcttgacgggacgagagcacctggagttttacggcagg
cttagaggagtaccagaaaaggaggtggccacggtggctgagtgggggattcagaagttg
gggctggtcaagtatgccaacaagtcagcgggaacgtacagcggcggcaacaaacgcaaa
ctctccacagcaatcgcgctgatcggctgtccccctgtcatttttctggacgagcccacc
actgggatggaccccaaagcccggaggttcttatgggactgcatcttgagtgtcatcaaa
gagggacgctcagtcattctcacatcacacagtatggaggagtgtgaggctctgtgcaca
cgcatggccatcatggttaacggttgtttcaagtgtctcgggagcatccagcatctgaag
aacagatttggcgacggctacacggtgatcgtccgggtcgccgggtcccctcccgaactc
aagcccgtcgaggactttatccggcagacgttcccaggcagcgttctcaaggagagtcac
cacaacacactccagtaccagcttccacacgcaccaggagctctggccaacatcttcagc
cacttcacccgccaccagcagaggctaaacttagaggactattctgtgtcccagactact
ctggatcaggtttttgtgaattttgcgaggcaccagcatgatgaggaagaccctcagggc
cacagcaacccggtggacatttcagacgagctgccgctccaggccgtgcagacctccaag
gaagaaaagatggtttaa
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