Austrofundulus limnaeus (annual killifish): 106514892
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Entry
106514892 CDS
T06063
Symbol
acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03015
mRNA surveillance pathway
alim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106514892 (acin1)
09122 Translation
03013 Nucleocytoplasmic transport
106514892 (acin1)
03015 mRNA surveillance pathway
106514892 (acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106514892 (acin1)
03041 Spliceosome [BR:
alim03041
]
106514892 (acin1)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106514892 (acin1)
Spliceosome [BR:
alim03041
]
Complex C
Other components
EJC/TREX
106514892 (acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Erf4
Motif
Other DBs
NCBI-GeneID:
106514892
NCBI-ProteinID:
XP_013859877
UniProt:
A0A2I4AWK6
LinkDB
All DBs
Position
Unknown
AA seq
2055 aa
AA seq
DB search
MAELSYFVCAPLLLFCLFHASDNRHVRRDIFSKTGSPEVDDVLSIIPITSPNATDPENTY
SLQLCTDIKEELESVKTQLLESAQDSSRLNEEVFGLNREVKKLSLNLNTCTSALSSVAGS
YQNQLQIQMNNLLDTVDSETFLVLKIMSLTRELNILEKKIKLAKESNGNATLISILQKEQ
EEKTNELNDKKLSIDRHPATQSNILQAISLQDQIWDLSQEEFTSETTVQLTGKILDLQQQ
LDGNINALKEKGDSISELLELISVQSKITVLEKRISFQTEESKAKIDDARRQLREKTEQL
KSVIVLLSKQKGNKTLTRKILKLQMEVEQLEDLISNSENVEATLIVIREDLEVQRKQEYL
LQKKLEEDDSVISQLILKIISIMQELRKQQKTSPGQQQDILTLFSTCKRDYIVAQTEIKH
LRQTCEESPVLKEKYKELEKKLNIKVEENQSYQETIEDLRKRVNQTERECPESEQKINDL
QNSLDSKVHELKSQTNNVTSLALQISTLTANLEELKRQLANSVSKSKVDELQQIIDEKNK
ELDSKTKKLKEISPQAQRFLQIVAKLTEIERLSNLPANDTNYAMITVLQDQIKTLIDGIK
DKDDENTKLIFQILASQDEIAKLQKYKEEQLEAQAKRVNELENELENIKIQIEQKTDQVT
IPGIRIANLSAEILELQSKIQPLEEELSDLKETYETNLAELQERLNTATIQLQDDELLLK
QSNSRIFDLLTQISDLKTQLKNAKKQASKPATQSIADLEEKLKTQQRESKKLESANKNLK
QEVEALRARCPVNADCGDLQRQLQQSQKDADYYHKLTQEKENALKNLRHNFDALAQEKTR
LQQDYDNLLKKQIHLEDQTIQTFERENALEQERLERERIEREKALEQERLEREQIEREKA
LEQERLEKECIEKEKTLEQERLEREQIEREKALQQERLEKERIEREKALEQERLEKERIE
REKALEQERLEKDRIKKEKALEQERLERERVLEAERREKERIEREKALEQERLEKERIEM
EKTLEQERLEKERALEQERLEREKAAELEKIEREKALEQERLDLEKREKERLERERLERE
AKEKAEREAALEQEKREKEKAEKKRKEQIEQEQALEKEKLERSKALEKKRSLKQEKEQAL
EQEILEKEKAKQREEVKQQKALEEDKEKLKIADKDTGSHLQPSKSNHEVDVPPQPAPPSL
SKELXRKSSIEAGQEDVHSPVSQPKAQAAKSDETPLPSHSSFKKFRFLRDSPVQPKTSST
SLVIKRPRTFSDSPQPQASLVTSPTGIGKRRSSTKQEEPLIGTVQEVGAVTVGSAKSQSE
KSTEKVSQDQSPKESGAKNLVLEEKNQMASPQTEASVKESXKSAKVLEESKNSSSPVDTS
EDGGGDARKAEKRARQRSSSSDSSSSESDSGSSSSQSSGSSISSQDKTSSSSRGREEEKC
KAEFSPLHVETAEAVKDKETPVKRNNTADKDVHTTNLDTEGPTKAEPHKKRKHSEGEEEK
EKQRQMKEAVTTDPEKLSGTGEEVPKVFSARKISLGSTKSSPGSGEGEQESAPVGRKRRW
GSSTAVTAKKPSISITTDSLKSLIPDIKPSLGQEAVVDLHPEEPALSGAEDEEHEGSDQN
LQIRRTVTQVVHTEENGQQEAKRSRTEEFEEEDSQLEQERIKVHEEQMDTSIPEALEAQS
PPQLNQDVEIGTVTPSETLIRRSIKQQKTGVSITIDDPVRTSRQPSPPRGKVSNIVHVCN
LVRPFTLGQLKELLSRTGTLVEDGFWIDKIKSHCYVTYSCIEEAVATRAALHGVKWPQSN
PKVLRVDFCEQDELDFHKGLIVADKPVGEEAGPTPGRGRTSGLPSLLPDRELWAEREREM
ERRERARAEREWDRDKVKEFGKPGEEKDGGPRRSRSRERRRKERGKSKEKKMEKKAEDPP
AKLLDDLFLKTKAAPCIYWLPLTEEQFLEREAGRAERKKQREKLRKEQEEEEAKKKEEER
KERVKAAAAPTGDRSEVGDKDRDKERDRGRDRDRDRIRDRERERENDKRRDGYRRPGGSS
ARRSRSRSDPKERRR
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactctcttattttgtctgtgctcctcttctgctcttctgcctctttcatgct
tctgacaacaggcatgttcgtcgtgacattttcagtaaaacaggaagcccagaggtggac
gatgtcctatcaattatcccaataacctcaccaaatgcaacagatccagaaaatacatac
agccttcagctttgtactgacataaaagaagagctggaatcagtgaaaacacagcttctg
gaatcagctcaggacagttcccggctcaatgaggaggtctttgggttgaacagagaagtc
aagaagctcagtctgaatcttaacacctgcacttctgccttgtcgtctgtcgccggctct
tatcaaaaccagctgcagatacaaatgaacaacctgttggacacagttgacagtgaaaca
tttcttgtcttgaagattatgagcctcaccagagagctgaatattttagaaaagaaaatt
aagcttgctaaggaatcaaatggaaacgctaccctgatatcgattctgcaaaaggaacag
gaagaaaagacmaatgaactgaacgataagaagctaagtattgatagacaccctgcaacc
caatctaacattctacaggcgatctcactgcaggatcagatctgggatttaagtcaggaa
gagtttaccagcgaaactaccgttcagctcaccgggaagattctggatctacaacaacaa
ctcgatggaaatatcaatgcgctgaaagaaaaaggagactcgatctcagagttgctggag
ctgatttctgtgcagagtaagatcacagtgttggagaagaggatcagtttccagactgag
gaatccaaggctaaaattgatgacgctcgtcgacaactgagggaaaagacagagcaactt
aagagcgtaattgtgctgttgtctaagcagaagggcaacaaaacactcacaagaaaaatt
ctgaagctgcagatggaggtggaacaattagaagatctgatttcaaattcggagaatgtg
gaagctacacttattgtaataagagaagatttggaggtacagagaaaacaagagtacctt
ttgcagaaaaagctggaggaagacgacagcgtcatctcacagctgattttgaaaattatc
agcataatgcaagagctgagaaagcagcagaagacatcaccaggtcaacagcaggatatt
ttgacgttgttcagcacttgtaaacgtgactatattgtggcccaaactgaaataaaacac
ctgcggcaaacatgtgaggagtcccctgtacttaaagaaaaatataaagagctggaaaaa
aagttaaatattaaagtggaggagaaccagagttaccaggagacaattgaagatctgcgg
aaacgtgtgaaccagacagagagagagtgtcctgagagcgaacagaagattaatgatctg
cagaacagtttggattccaaggtccacgagctgaagtcccagaccaacaacgttacttca
cttgctcttcagatttctactctaactgcaaacctggaagaactgaagagacaactggca
aactctgtatccaagtccaaggtggacgaacttcaacaaatcatagatgagaagaacaaa
gaactggacagcaaaacaaaaaaactgaaagagataagtcctcaagctcaaagatttttg
cagattgtcgctaaactaaccgagattgaaagactgtcaaatttgccagctaacgataca
aattatgccatgattacagtacttcaagatcaaatcaagaccctgattgatggaattaaa
gacaaagacgatgagaacacaaaactgatctttcaaattttggcttctcaagatgaaata
gccaaacttcagaagtataaagaagaacaactggaggcacaagcgaaaagagtgaatgag
ctggaaaatgaactggagaacatcaaaattcagatcgaacaaaaaactgaccaagtgact
atacctggtataaggattgctaatctatcggctgagattttggagcttcaaagtaaaatc
caaccactggaggaagagctatcagacctcaaggaaacatatgagacaaacctcgctgag
cttcaagaaagactcaacaccgcaacgattcaacttcaagatgatgaacttctgctgaag
cagtcaaactcaaggatttttgacctgttaacgcagatcagtgacctgaagactcaactg
aaaaatgccaaaaaacaggcatctaaacctgctacacagagcatcgcagacctggaagaa
aaactgaaaacccaacagagagagagcaagaaacttgaaagcgccaacaaaaacttaaaa
caagaagtggaggcgctgagagcacgctgccctgtgaatgcagactgtggagacttacag
agacagttgcagcagagccagaaggatgcagactattaccacaagctgacgcaggagaag
gaaaacgccttgaaaaatctgagacataattttgacgcactggctcaagagaaaaccaga
ctgcagcaagattacgataatcttctgaagaaacaaattcacttggaagaccagacaatc
caaaccttcgagagagaaaatgctctagaacaggagaggctagaaagagaacggatcgag
agagaaaaggctctagaacaggagaggctagaaagagaacagatcgagagagaaaaggct
ctagaacaggagaggctggaaaaagaatgtatcgaaaaagaaaagactctagaacaggag
aggctagaaagagaacagatcgagagagaaaaggctctacaacaggagaggctagaaaaa
gaacggatcgagagagaaaaggctctagaacaggagaggctagaaaaagaacggatcgag
agagaaaaggctctagaacaggagaggctggaaaaagaccgaatcaaaaaagagaaggcc
ctggaacaggagaggctggagagagaacgagttctagaggctgagagaagggagaaggaa
agaatcgagagagaaaaagctcttgaacaggagaggttggaaaaggaaaggattgagatg
gagaaaaccctggaacaagagagactagaaaaggagagggctttggaacaagagagacta
gagcgcgagaaggctgcagagttggaaaaaattgagagagagaaggctttggaacaagaa
aggctggacctagagaagagggaaaaagagagacttgagagggaaagactagagagagaa
gcaaaagagaaggcagagagggaagcagctctagaacaagagaagagagagaaagaaaag
gcagagaagaaaagaaaagaacagatagagcaagaacaagctttagagaaggagaaactt
gaaagatcaaaggcactggagaagaaaagatctttgaagcaggaaaaagaacaagctctt
gaacaggaaatactggagaaggagaaagcaaagcagagagaagaggtgaaacaacaaaag
gcactggaagaggataaagagaagttaaagatagctgacaaagacacggggagtcacctt
caaccatccaaaagtaaccatgaagttgatgtacctccccagccagctcctccttccctg
tccaaagaactgcmtcgaaaatcatcaatagaggcagggcaggaagatgtccattctcca
gtgtctcagcctaaagcccaggcggcaaagtctgatgaaacacccctgccttctcactca
tcatttaagaagtttcgctttctaagggactcccccgttcagcccaagacctcatccact
tctttggttattaagcgaccacgtactttctctgatagcccccagccacaggcctcactt
gtcacctcacccaccggtattgggaaacgacgatcctctactaarcaggaggagccactg
attggaacagtccaggaggttggtgctgtaactgtaggatctgcaaagtcccagtctgag
aagagcactgaaaaagtttcacaggatcagagccctaaagaaagtggggcaaaaaacctt
gttttggaggagaaaaatcagatggcctcgccccagactgaagcatctgtcaaggagtct
wtcaaaagtgctaaagtactggaagaaagcaagaattcttcaagtccagtggacacttca
gaagatgggggaggagatgcaaggaaggcagagaaaagagcacgacaaagatcatcgtcg
agcgattcatcctcatcagaatcagattctgggtcctcatcatctcagtcgtctggatca
tccatatcctctcaagataaaacatcttcctcctctagaggtagagaggaggagaaatgt
aaagcagaattctcaccactgcatgtggagacagctgaggctgtaaaagacaaagagaca
ccagtaaaaaggaataacactgctgataaagatgttcacactacgaatctggacacagag
ggaccaaccaaagcagaaccacacaagaagagaaagcatagtgagggagaagaggaaaaa
gaaaaacaaaggcagatgaaagaggctgtcacgactgacccagaaaagctttcagggact
ggtgaggaggtaccaaaggttttctcagcacgtaagatctcactcggcagcactaaatca
tcccccggcagtggagagggtgaacaggagtctgcacctgttggccgcaagagaagatgg
ggctccagcacagctgtcactgccaagaaaccctccatcagcatcaccactgattcactt
aagtctttgattcctgatatcaagccatccctgggccaggaggcagtagtggatcttcat
cctgaggaacctgctctatctggggctgaggacgaagagcatgagggttctgaccagaac
cttcagatccgacgcacggtcacacaggtggtgcatactgaggagaatggacagcaagag
gcaaagagaagcaggactgaagagtttgaagaggaggattcacagttggagcaagaaaga
ataaaggtccatgaagagcagatggacacgtccatccctgaagctttggaagctcagtct
ccacctcaactaaaccaagacgttgaaattggcactgtgacgcccagcgaaaccctcatt
cgtcgctccatcaagcagcagaaaacgggtgtttccatcaccatcgatgaccctgttcgt
acgagccggcagccttcaccgcctcgaggcaaagtctccaatattgttcacgtctgcaac
ctggtgaggccgttcacactcggacagctcaaggagcttctcagcagaacagggactctg
gtggaggatggcttctggattgataaaatcaaatcccattgttatgttacttactcgtgt
atagaggaggcagtggctacacgagcagctcttcatggagttaaatggcctcaaagcaac
ccaaaagtccttcgagtggacttctgtgagcaggatgagttggatttccacaaaggcttg
attgtagcagacaaacccgtaggagaagaagcggggccgacccctggacgtggacgaaca
tcagggctgccctccctcctccccgacagagagctgtgggccgagcgcgagcgagagatg
gagcgtagagagcgggctcgagcggagcgggagtgggatcgtgacaaagtcaaagagttc
gggaaacctggggaggagaaggacggaggccctcggaggtcgcgctccagagagagacga
cgcaaggagagagggaagagcaaggagaagaagatggaaaagaaagctgaagacccccca
gccaaactgcttgatgacttgttcctcaaaactaaagcagctccttgcatttactggctt
ccacttaccgaggaacagtttctagagcgggaagccggcagagcagaaaggaagaaacaa
cgcgagaagctgaggaaagaacaagaagaagaggaggcgaagaaaaaggaagaggagcgt
aaggagcgggtgaaagctgcggctgccccaacaggagatcgaagtgaggttggggacaag
gaccgagacaaagagagggacagaggtagagacagagaccgtgacaggattagagacagg
gagagagagcgggagaacgacaaacgcagggatggttatcgtagaccaggaggcagctca
gctcgccgctcacgcagccgaagcgatccgaaagagaggagacgctaa
DBGET
integrated database retrieval system
