KEGG   Austrofundulus limnaeus (annual killifish): 106514919
Entry
106514919         CDS       T06063                                 
Symbol
rfwd2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim04115  p53 signaling pathway
alim04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106514919 (rfwd2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    106514919 (rfwd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106514919 (rfwd2)
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106514919 (rfwd2)
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106514919 (rfwd2)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106514919 (rfwd2)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-C3HC4_4 Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_like WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_WDR41 zf-rbx1 zf-RING_10 WDR90_beta-prop_4th Beta-prop_SPT8 RING-HC_RBR_RNF216 Sina_RING RING_ZNF598 zf-C3HC4_IRF-2BP1_2 zf-C2H2_AcuF
Other DBs
NCBI-GeneID: 106514919
NCBI-ProteinID: XP_013859909
UniProt: A0A2I4AWP0
LinkDB
Position
Unknown
AA seq 706 aa
MSGSRPQQSGGGASSVPSPSTSSSSTGGGSGSTAVTSNGNSSGNVVPSSRTLPAAGEGGM
SGSPVAAVPSSRAGYASMGRPTPSTGSRKRSLHQAPLYNGLLNSYEDKSNDFVCPICFEM
IEEAHMTKCGHSFCFKCIRESLKDSNRCPKCNYTVDSVEQLYPNFLVNELILKQKQRSEE
KRLKLDPPNWSRWQVFQDILNPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILME
FLKEARRNKREQLDQLQKELNFLEEDIKRVEEMSGLYSPIIEAECTVPNVETPSPAPSNI
IDPPDYNPPPGFGATTPGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRN
LNQLDDFMECLSKFTRYNTVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI
KVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR
SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSP
TSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLW
NVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKS
VLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgtcaggcagccggccgcagcaaagcggcggtggggcgagttcggtgcctagccccagc
accagcagcagcagcacaggaggaggcagtggaagcaccgccgtcactagcaatgggaac
tcttcgggaaatgttgtgccctcctcccgaactctgccagcagccggcgagggaggcatg
tctgggtcacccgtggccgcggtgccgtcgtcccgggccgggtatgcttccatgggcaga
ccgacaccgtccacaggcagcaggaagaggtccctccatcaagcacctttatacaatggc
ctcttgaattcatacgaagataaaagcaacgactttgtctgtccaatttgcttcgaaatg
atagaggaagcacacatgacaaagtgtggccacagtttttgtttcaagtgtattcgcgag
agcttgaaggacagcaacagatgtcccaagtgtaactatactgttgatagtgtggaacag
ctgtacccaaactttcttgtaaatgagctgatcctgaaacagaaacagaggtcggaggag
aagagactgaaattagatcctcctaactggtctcggtggcaggtcttccaggatattttg
aatcctgatcaggagaacttggatcttgcaaacgtcaatctgatgttggagcttctggtt
cagaagaagaagcagctggaggcggaatcccaggcagctcagagacagatcctcatggag
tttctgaaagaagccaggagaaacaagagagagcaactagaccaactacagaaagagctt
aacttccttgaagaagacattaaacgtgttgaggaaatgagtgggctttattctccaata
atcgaggcagagtgtacagtgcctaatgttgagaccccctctccagcacccagtaacatc
attgatccaccagattacaatccgcctccaggatttggtgcaacaactccgggaaagcga
cagacctggtacaacagcactctagcatcaagaagaaagagactgacggctcattttgag
gatctagagcagtgctacttctctaacaagatgtcacgcatcacagatgaaggcaggaac
ctgaaccagctggatgattttatggagtgtttgtctaaattcactcgctacaacactgtg
cggccactggccaccctctcctacgccagtgatctgtataacggctccagtattgtctct
agtattgagtttgaccgggattgtgactactttgccatcgctggtgtgaccaagaagatc
aaggtttttgagtatggaactgtcatccaggatgcggtggacatccactacccggtcaat
gaaatgacctgcaattccaaaatcagctgtatcagctggagcagttatcacaagaacctc
ttggccagcagtgattatgaaggtaccgtcattttgtgggatggcttcaccgggcagagg
tccaaagtctaccaggaacatgaaaaaagatgttggagtgtcgactttaatctgatggac
cccaagctcttagcttctggttctgatgatgctaaagtgaagctgtggtcaaccaatctg
gacaactcagtggctagtatcgaggctaaagctaatgtttgttgtgttaaattcagcccg
acctcaagatatcacttggccttcggctgtgcggaccactgtgtccactactatgatcta
cgcaacactaagcagccaatcatggtgttcaaaggccacaggaaggccgtgtcctacgcc
aagtttgtaaacggagaggaaattgtttctgcgtcgacagacagccagctgaagttgtgg
aacgtcaacaaacctcactgcctgcgctccttcaaaggtcacattaatgagaagaacttt
gttgggctggcatccaatggcgactatgttgcctgtggcagtgagaacaactccttgtat
ctgtactacaaaggactttccaagacattgctaacgttcaagtttgacacagtaaagagt
gtcctggacaaggacaagaaagaggatgacaccaatgaatttgtcagtgccgtctgttgg
agggctctgcctgatggagaatcaaacgttctgatcgctgcaaacagtcagggaacaatc
aaggtacttgagctcgtctga

DBGET integrated database retrieval system