Austrofundulus limnaeus (annual killifish): 106515367
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Entry
106515367 CDS
T06063
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106515367 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106515367 (pnpt1)
03016 Transfer RNA biogenesis [BR:
alim03016
]
106515367 (pnpt1)
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
106515367 (pnpt1)
Messenger RNA biogenesis [BR:
alim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
106515367 (pnpt1)
Transfer RNA biogenesis [BR:
alim03016
]
Prokaryotic type
tRNA degradation factors
106515367 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
106515367
NCBI-ProteinID:
XP_013860587
UniProt:
A0A2I4AYL3
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MTSFLRLGRSVSRLHVRPCHQSVYSRNTNLRRVEVDLGEKKLEISSGKFARFADGAAVVQ
LGDTSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYIRRELGTTDNEILTSRLI
DRSIRPLFPAGYFYDTQVLCNLLAVDGVNDPDVLAINAASAALALSDIPWDGPIGAVRVG
MVNGELLVNPTRAEMASSTLNLIVSGAPSSQVVMIEASAENVLQQDFCHAVKMGVKHSQQ
IIKGIQRLAREQNVTKRTPAKTFLAPTEMLEHTRKTLSEKIYAVFTDITHDKISRDEAIN
KIRLEAEENLKENFPQAEPFEIIESFNVVTKEIFRNLVLNEYRRCDGRALTALRNISCDV
DLFKPLHGSALFQRGQTQVLCSVTFDSMESSVKTDIITTALSGIKDKNFMLHYEFPPYAT
NETGRMGGLNRRELGHGALAEKALRPVVPKEFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAIGLISKANSENPSELEDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKKEILGIMNKCISKPREHRKENGPIVENIRVP
VSRRARFVGPGGYNLRRIQAQTGVTISQVDEETFSVFAPTPGAMNEAQEFIREICKDDQD
QQLEFGAIYTATITEIHDIGVMVKLYTNMSPVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPSATFVKTLSEKQSISMGSNNSEMPDANL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcttttctccgactgggccgctcggtgtcccgccttcacgtgcgtccgtgtcac
cagagtgtttacagcagaaacacaaacctgcggcgcgtggaggtggacctcggagagaag
aaacttgaaatctcttcggggaagtttgccagatttgctgatggagctgctgttgttcag
ttgggagacacctcagtgatggtgacggctgtaagcaagactaaaccttctccatctcag
ttcatgccacttgtggtggactataggcagaaagcagctgctgcaggtcgaatccccacc
aactatatcaggcgagagctgggcaccaccgacaatgagatcctcaccagcagactcatc
gatcggtcgattagaccccttttccctgccggttacttttatgacacgcaggtcctttgt
aacttgcttgcagtggacggtgtcaatgatccagatgtgcttgctattaacgcagcctct
gctgctctggctctgtctgacatcccctgggatggccccataggtgccgtgcgagttggc
atggttaatggagagctgctggtcaacccaacgagggcagagatggcctccagcacttta
aacctgatcgtgtctggagctcccagcagtcaagtggtgatgatcgaggcgtctgccgag
aacgtgctgcagcaggacttctgccacgccgtgaagatgggagtcaaacactcccagcag
atcataaagggcatccagcggctggcgcgggagcagaatgtaaccaaacgcacgccggcc
aagacgttcttagccccgactgaaatgctggagcacacccggaaaactttatcagaaaaa
atttatgctgttttcacagatatcacacacgataagatttcgagagatgaagcgatcaac
aaaattcgactagaagcagaagaaaacttaaaagaaaatttccctcaagccgagcccttt
gaaatcattgaatcgttcaacgttgtgaccaaagagattttccgtaatttagtgcttaac
gagtacaggaggtgtgatgggagagcactgacggctctgaggaacatttcctgcgacgtt
gacctctttaagccgctccacggctcagctctgtttcagagaggacaaacgcaggtgctg
tgcagtgtcacctttgactctatggagtccagtgtcaaaacagatattatcaccacagct
ctcagtggcattaaggacaaaaactttatgcttcattatgagtttcctccatatgcaacc
aatgagactggcaggatgggaggcctcaacaggagagagctcggacacggcgctctggct
gagaaggctctgaggccggtcgttcctaaagagtttcccttcaccatcagagtcacagcg
gaggtgctggagtcaaacggatcctcctcaatggcttctgcttgtggaggcagtcttgct
cttatggatgcaggtgttcccatctcttcagctgtggcaggtgttgccattggtcttatc
tcaaaggctaattcagaaaatccatctgagttagaggattacagattactaacagatatt
ctgggaatagaggattatcttggagacatggacttcaaattggcaggaacaaacaagggg
atcactgctttacaggctgatgtgaagataccaggtttacctctcaaagtggtgatggag
gcgatccagcaggccacagtggcaaagaaggaaatcttgggcattatgaacaaatgtata
tcgaaacccagagagcacagaaaagagaacgggcctatcgtcgaaaatatcagagttcct
gtttctagaagagctcgatttgttggtccgggaggatacaacctacgaaggattcaagct
caaacaggtgttacaataagtcaggtggacgaggagacgttttctgtgtttgctccaact
cctggagcgatgaatgaagctcaggagttcatcagagaaatctgcaaagatgatcaagat
cagcagctggagttcggtgccatctacacagccaccattacagaaatacacgacattggt
gtgatggtgaaactttataccaacatgagtcctgttctgttgcacaactcccagctggac
cacaaacggatcaagcatccaagtgctttgggtttagaggtgggacagcagatccaggtc
aagtactttggacgggatccgacagatggaagaatgcgactttcacggaaggtgcttcag
tctccttctgcgaccttcgttaaaacgctcagtgagaaacagagcatctctatgggatca
aacaacagtgaaatgcccgatgccaatttgtga
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