Austrofundulus limnaeus (annual killifish): 106515458
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Entry
106515458 CDS
T06063
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04270
Vascular smooth muscle contraction
alim04625
C-type lectin receptor signaling pathway
alim04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106515458 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
106515458 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
106515458 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106515458 (arhgef12)
Membrane trafficking [BR:
alim04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106515458 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
106515458
NCBI-ProteinID:
XP_013860729
UniProt:
A0A2I4AZ23
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MSDTQSSFTDRFNKKANRSSSILSKDHPPDKKPKSDKTSPPSNEFDPTEALVVQKSGNSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHTEVVKLIKSGSYVALTVLGRPPGLPQIPLPEADPEALGISLSSPNSPAS
ERPYSPLNCLSSLQSWDESSSACNQMADVLQKKFSKEQQELQAMKEKYNRNPSPKLLKDI
QEATKHIPQLQGQLFKATGTTQEAVSGEEEDNGSIIETDCVPAPKGDNSTDLSWSSTSAS
HMFGPGSPDSYCPKDSSCASPKSTPRNSFNSFHSPEAEDTTDLDALSPITVSSPPPFRLG
LQIIGAEDDYFDSDQEQGEMLNLTMLQTNGQCNSFNSIDQLKSRPAHLAAFLHHVISQFD
PAPVLCYLYADFYKQTNSKETRRVFLDFHSIFMDRAANLKVPVPESVSSDLMCLCVCVCV
CVFEDRRRMELIPEEINRQHVQTLQDSVIADIQKNLEDFRQKRSMGLTVAEGELTRLDQE
RVRDQVTLERERSYAENIISKIDDILITTQPTEEEKCTTIQYVIYTYMKHLGVRVKEPRN
LEPKRVWIGFLPKMKKSIKPDKEGDEKVEKVEKKPRFNFLAPQRRPSRIESVSKVVENRP
RPQKQVSQPTLGTNEPMEGGLRGSQSSEGSELTHSMSVNASTPNSITHSSDLSRDADIGG
TPTSAPSKLTDSFQSDPLGGFSSPASHLEFFSLDHLQEDDRENYRTHEGTPKAIRRLDGL
GLADVQSEDDQGTDSEHNPPNWQQLVGREVLAGLRPHEIKRQEVINELFYTERTHVRKLK
VLDHVFYQKLSKDAILPPADIKNIFTNLEEVLHLHVSVLEQMTAVRKRNESSVIGQIGDD
LLSWFSGGEEEKIKQAVGTFCSNQPFALEIIKTKQKKDSRFTSFIQEAESNRLCRRQQLK
DIIPVEMLRLTKYPLLLDNIVKYTDDAEEKAKVKQAADCCRRILCHVNQALKESEDKQKL
EDYQRRLDLSSLKQTDNPMILELKNLDLTKKTLIHEGPLSWKVNKDKTIELFTLLLEDIL
VLLQKQDERLILKCHSKNLSGAADIKHIYSPVIKLSTVLVRSVATDNKSFFVLSMSENGP
QIYELMAPTVSDQKTWQSLIPQRADAIKAKPHSIIPLPQPDGERDGVEVISAGASRLSRD
PDRTSTGSTQSTDKESSSASRSAFQSSPVGGNPFEEATKDEEEEEEEEEEGFLDPELPYQ
VSEVDKEGDLFDVFPSRAEEALKTLAALKQVLVTQLMSQEAAEQTKRSTGARLLRTTSLR
TPTDNRTKVMVHNSSEKSSSKTQELAQDLGSGDTGFFDSPEDYGCLVLGGYGGPGESTTD
DDILASATGKQLSTSQVCAADSGINLRFSSTSQVGSLSTFSRQVLSHLRNLQTNLNYLKE
VEAKYNNLIRQRPARSVTETDENKDKR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttaacaagaaagcaaacagaagcagc
agcattctcagcaaagaccatccgccagacaagaaacccaaaagtgataaaacctcacct
ccctccaatgagtttgacccaacagaagctctggtggtgcagaagagtggcaacagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaatcatccag
aaagatgaaaatggctttgggctcacagtcagtggtgacaaccctgtgtttgtgcagctg
gtcaaagaagatggggctgcgatgcgggctggtgttcagacaggagataggatcattaag
gttaacgggacccttgttacacattctaatcacaccgaagttgtgaaacttatcaaatcg
ggctcttatgtggccctcacggttttgggacgccctccagggcttccccagatcccattg
cctgaagcagatcctgaggcattgggtattagcctatcctctccaaactctccagcatca
gaacgcccatacagtcctctgaactgcctctcctctctacaatcatgggatgagagcagc
agtgcctgcaaccagatggctgatgttttgcaaaagaagttctcaaaagagcagcaggag
cttcaggccatgaaagaaaagtacaacaggaacccctcccccaaactactgaaagacatt
caggaagcaacaaaacacattcctcagctgcagggtcagctcttcaaggctactgggaca
acacaggaggctgtttcaggtgaagaagaagacaatggtagcataatagagacagattgt
gtacctgcccctaaaggagacaacagcacagacctttcctggagcagcacttctgcatct
cacatgtttggacccggatccccagatagctattgtccaaaagactcctcctgtgccagc
cccaaaagcacacccaggaacagcttcaactccttccactccccggaggcagaggatacc
actgacttggacgccctgtctcccatcacagtcagcagcccccctccttttcgccttggc
ttgcaaataataggagctgaagatgactatttcgattcagaccaagagcaaggtgaaatg
ttgaacttaactatgttacagacaaatggccagtgtaacagctttaacagtatcgatcag
ctcaagtctcgtccggcccacctcgcagcattcctgcaccatgtcatctctcagttcgac
cccgctccagtgctgtgctacctctatgctgacttctataagcaaactaactccaaagag
accagacgggtgttcttggacttccactccatctttatggaccgggcagcaaatttaaaa
gttcccgttccggaatcagtttcttctgatctcatgtgcttgtgtgtgtgtgtgtgtgtg
tgtgtgtttgaagaccgacggcggatggagctgatcccagaggaaataaacagacaacac
gttcaaacactgcaagactctgtgattgctgatattcagaaaaaccttgaagacttcagg
cagaaacgtagcatgggcctgacggtggccgaaggcgaactgaccagactcgaccaagag
agagtccgagaccaggtcactcttgaacgggaacgttcgtatgccgaaaacatcatcagc
aaaatagatgacatcctgataactactcaacccacagaggaagagaaatgcactacaata
cagtatgttatctatacatacatgaagcaccttggtgtgagggtcaaggaacctcgaaat
ctggagcccaaacgtgtttggatcggctttcttccaaagatgaagaaaagcataaagcca
gataaggaaggagatgagaaagtggagaaagtggagaaaaaacccagatttaattttctt
gcacctcagcgtcggcccagccgcatcgaatcagtgagtaaagtcgtcgaaaatcgcccc
aggccacagaaacaggtctctcagcctacacttgggacaaacgaaccaatggaaggcggt
ttaagaggcagccaatccagtgaaggctctgaactcactcattccatgtcggtcaacgcc
tcgactccaaacagcatcacccacagctcagacttgagccgagatgctgatattggtggg
acaccaacatcagccccctccaagctgaccgacagttttcaatcagaccctctgggcggg
ttttcatctcctgcttcacacttggagttttttagtctagaccatcttcaagaggatgac
agagaaaattacagaactcatgagggaacaccaaaggctatcagacgacttgatggattg
ggcctagctgacgttcagagtgaggatgatcagggtaccgattctgaacacaacccgcct
aactggcagcagttggtgggacgagaagttcttgccggtctcaggcctcacgagatcaag
agacaagaagttatcaacgagctgttttacacagagcgcacacatgtacgaaagctcaag
gttttggaccacgttttctaccagaagctttccaaagatgcaatccttcctcctgctgac
atcaagaacatcttcaccaatctggaagaggttctccatctgcacgtttcagtacttgaa
caaatgacagcagttcgtaagagaaatgagtcttcagtaattggtcaaataggagatgac
ttgctctcttggttcagcggtggagaggaggagaaaatcaagcaagctgtggggacgttt
tgcagcaaccagccttttgctctggagataatcaagaccaagcagaagaaagactcaagg
ttcacttcattcatccaggaggcagagagtaacagactgtgtcgccgacagcagcttaaa
gacatcattcctgtagaaatgcttcggctcaccaagtatcctctgctgctagacaacata
gtcaaatatacagatgacgcagaggagaaggcaaaagtaaagcaggcagcagactgctgt
agaaggatcctctgtcacgttaaccaggctttgaaagagtctgaggacaagcagaaatta
gaagattatcagagaagactggacctctcctcactaaagcagacagacaaccccatgatc
ctggagctaaagaacctggatctaaccaagaagacattgattcacgagggtccactgtca
tggaaagtgaacaaggacaagactatcgagttgttcacgctcctcttggaggacattctc
gttctgctacagaaacaagatgaacgtctaatccttaagtgtcacagcaaaaacctgtca
ggagccgcagatatcaaacatatctacagccccgtcatcaagctcagcactgttctagtg
cgttctgtggctacagacaacaagtccttcttcgttctctccatgtcagaaaacggccct
cagatctatgagctcatggcgcccacagtctcagatcagaaaacgtggcaaagtctgatc
cctcagagagctgatgccataaaagccaagcctcacagcatcataccattacctcagcct
gatggggagagagatggagtggaggtcatatcagcaggtgcttccagactaagcagagac
ccggaccgcacgtccaccggcagcactcagtccacagataaagagagcagttcagcctct
agaagtgcatttcagagctctccagttggtggtaatccgtttgaagaggcgacgaaagat
gaggaggaggaggaggaggaggaagaggaaggctttttggacccagaacttccatatcaa
gtgtctgaagtggacaaagagggagacttgtttgatgtgttcccttccagagcagaggag
gcacttaaaacattggcagcattaaagcaagtgttggtgactcagctgatgtcccaggag
gcggcagagcaaaccaaacgctccactggagctcgtctcctcaggaccacctctctgcgg
accccaacagacaaccgcactaaagtgatggttcacaacagttcagagaaaagtagctca
aaaacacaggaactggctcaagatcttggatcaggggacactggattctttgactcacct
gaagattacggatgcttggtcctggggggctatggtggtcctggggagagcaccacagat
gatgacatcttggcttcagccactgggaagcagctgagcacctcgcaagtttgtgcagcc
gactctggcatcaatttgagattttcctcaacgtcacaggtcggcagcctctccaccttc
agcagacaggtgctgtctcaccttagaaaccttcagaccaacctcaactatctgaaggag
gttgaggctaagtataataatttaatacgtcaaaggccagcgaggtcagtaacagaaacg
gatgaaaacaaagataagagatag
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integrated database retrieval system
