Austrofundulus limnaeus (annual killifish): 106515583
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Entry
106515583 CDS
T06063
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03430
Mismatch repair
alim03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106515583 (mlh1)
03460 Fanconi anemia pathway
106515583 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106515583 (mlh1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106515583 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
106515583
NCBI-ProteinID:
XP_013860909
UniProt:
A0A2I4AZK9
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTNIQVTVKDGGLKLLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAFRASYSDGKLKAPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPADEYSRIVEVVSRY
AIHNSGKSFSVKKGETVADVRTLPNASVVDNIRSVFGNAVSRELIEVSCEDKKLAFKMKG
YVSNANYFMKKCVLVLFINHRLVESSALKKVLETVYAAYLPKNTHPFLYLSLEISPQNVD
VNVHPTKHEVHFLHEDAIMESVQKQVESKLLGSNSSRTFFTQTLLPGLPVSGGAETRTSG
AAAESAERVYAHQLVRTDCRAQKLHAFLKPKDKTPAQTEPEPEPAGPSGGQTETRTDKPD
CVEMEEEEEEESVQEGPEEEEEVQRKRPRTEEEEEELTAAAAPRRRAIKLSSVKELRAEI
TENTHKGLQEMLRSHSFVGCVDPQWTLVQHHTKLYLLNSTRLRCERQDHGPVRPTRSGPV
HFSLCFSSSQELFYQILVFDFGNFGVLRLSEPAPLYDLAMLALDSEESGWTEEDGPKEGL
AQYIVDFLRRKAEMLEDYFSVEIDQEGNLTGLPLLLDGYTPIMEGLPMFVLRLATEVNWD
QEKDCFRDFCRECSSFYSIRKQFVLEAEPGQDGEADSWRWKVEHVVFKALRTLFSPPRGF
SEDGSVLQVANLPDLYKVFERCF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggttatccggaggctggacgagaccgtcgtcaaccgaatcgcagcgggagaa
gtgatccagcgtccggccaacgccgtcaaagagatgatcgagaactgtttggatgcgaag
tccacgaacatccaggtgaccgtgaaggacggaggactgaagctccttcagattcaggac
aacgggaccggcattaggaaagaagacatggaaatcgtctgtgaacggttcaccaccagc
aaactccaaaccttcgaggatctctccgcgatcgcaacctacggattccgaggagaggct
ctggccagcatcagccacgtggctcacgtcaccatcacaacaaagacggcagacgccaag
tgtgcgttcagagccagctatagcgacggcaaactcaaagctccgcccaaaccgtgcgcc
ggcaaccaggggacgcagattctcgtggaggacctgttctacaacgtgtccaccaggagg
aaggccctgaagagccccgctgacgagtactcccggatcgtggaagtcgtcagcaggtac
gccatacacaactcagggaagagcttctccgtcaagaagggagagacggtggccgacgtc
aggacgctgcccaacgcctcggtggtggacaacatccggagcgtgttcgggaacgccgtc
agcagggagctgatcgaggtcagctgtgaggacaagaagctcgccttcaagatgaaaggc
tacgtctcaaacgcaaactacttcatgaagaaatgtgtcctggttctgttcatcaaccat
cgtctggtggagtccagtgcgctgaagaaggtgctggagacggtttacgctgcctacctt
cccaagaacacgcaccccttcctctacctcagtttggagatttctccgcagaacgtggac
gtgaacgtgcacccgaccaaacacgaggtgcacttcctgcacgaggacgccatcatggag
agcgttcagaaacaggtggagagcaaactgctgggctccaactcgtcacgcaccttcttc
acccagactctgctgcctgggctgccggtctcaggcggagcagagaccaggacctccggc
gccgcggcggagtccgccgagcgcgtctacgcccaccagctggtgaggaccgactgtcgc
gctcagaaactgcacgctttcctcaaacccaaagacaagacccccgcccagacagaacca
gaaccagaaccggccgggcccagcggcggacaaaccgagaccaggaccgataaaccagac
tgtgtagagatggaggaggaggaggaggaggagtccgtgcaggaaggaccagaggaagag
gaggaggtgcagaggaagaggccgaggacggaggaggaagaggaggagctgacggctgca
gctgcgcctcggaggagagcgatcaaactgagcagcgtcaaggagctgcgagccgagatc
actgagaacacacacaaaggtcttcaggaaatgctgcggagccactcgttcgtgggctgt
gtggacccccagtggactctggtccagcaccacaccaagctgtacctgctgaacagcacc
aggctcaggtgtgagcggcaggatcacggcccggtccggccgacccggtccggcccggtt
catttcagtttgtgtttctcttccagccaggagctcttctaccagatccttgttttcgac
ttcgggaacttcggggtcctccggttgtctgaaccggccccgctctacgacctggccatg
ttggctctggactcggaggagagcggctggacggaggaggacggtcctaaggagggtctg
gctcagtacatcgtggacttcctgcggaggaaggcggagatgctggaggattatttttct
gtagagatcgatcaggaagggaatctaacgggcctgccgctyctcctggacgggtacacc
cccatcatggagggcctgcccatgttcgtgctccgcctcgccaccgaggtgaactgggac
caggagaaggactgcttcagggacttctgcagggagtgcagctccttctactccatcagg
aaacagtttgttctggaggcggagcctggccaggatggcgaggcggactcttggcgctgg
aaggtggagcacgtggtcttcaaagctctccggaccctcttcagtcctccgaggggcttc
agcgaggacggctcggttctgcaggtggcgaacctgccggatctttacaaagtgttcgag
cggtgcttttaa
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