Austrofundulus limnaeus (annual killifish): 106515755
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Entry
106515755 CDS
T06063
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04514
Cell adhesion molecules
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106515755 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106515755 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
alim00535
]
106515755 (sdc3)
Proteoglycans [BR:
alim00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
106515755 (sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
PRP38_assoc
Phage_zn_bind_6
AAA_11
POP1_C
Motif
Other DBs
NCBI-GeneID:
106515755
NCBI-ProteinID:
XP_013861144
UniProt:
A0A2I4B083
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MKLPVLLALAALLARGSTQGQTWSPPIDDEGSTTDDFYDDEDLYSGSGSGALPVPDISIR
PTSVRVAFTTEETLLLSTTQATSPAPSAPPAAEPSPSPSPEDPATTPLPTEADGESGAFF
EKELEIQREKELELEREKQREMERERERERVRELEREREREREREREREREREREKERER
QRELERLRAAQTTAAPRSPAVFPAVTTNQAASTAESPGVSAGFDDLSTTEEEEEEDMYLP
PESTSFYSETTATGDTSTTAETTPEPTTASPTTTTASTTIRTRIAFRPRVPITAATQAVP
TTRTTRPQPPSTTQENTNDVGPAGPSGDFEIRDDRRNGVVQGVMPVDPDLLGNTVDGGSS
AAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVT
YQKPDKQEEFYA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcccgtgctgctggcgctcgcggcgctgctcgcccgcggctccacgcaggga
cagacgtggtctccacccatcgatgacgagggctcgacgacggacgacttttacgatgac
gaggacctctactcgggctccggctctggcgctcttccagttcctgacatcagcatcagg
ccgacgtccgtgcgcgtggctttcaccacagaggagactctcctcctctcgaccacgcag
gcaacgagccccgccccctcggccccgcccgcggccgagcccagccccagtccgagcccc
gaggaccccgccaccaccccgctgcccaccgaggccgacggggagagcggagccttcttc
gagaaggagctggagatccagcgagagaaggagctggagctggagagggagaagcagagg
gagatggagagagagagggagcgggagagggtccgcgagctggagcgggaacgggagcgg
gagcgagaacgagaacgtgagagggagcgggagagagaacgggagaaggaacgggaaagg
cagagggagctggagcgtctccgggctgctcagaccaccgccgcccctcgctcgcctgcc
gtcttccccgcggtgaccaccaaccaggctgccagcaccgccgaaagcccaggagtctct
gccggattcgatgacctgagcaccacagaggaggaggaggaggaggacatgtacctgccr
ccagagtccacctccttttactccgaaaccaccgcaacaggagatacgtccacgacagca
gagaccacacctgagcccaccacggcctcacccaccaccaccacagcatcgaccaccatc
agaaccaggatcgcctttaggcccagggtccccataacagcagccactcaggcggtgccg
acgacacgaacgacacgcccacagccgccctcaacgacgcaggagaacaccaatgacgtg
ggccccgcaggaccgagcggagatttcgagatccgagatgatcggcgcaacggtgtggtc
cagggcgtgatgccggtcgaccccgatttgctcggcaacacggtggacggaggaagttct
gctgctcagctgccgcagaaaaacatcctggagagaaaagaggtcttaatagctgtgata
gttggaggcgtggtgggcgccctgttcgccgccttcctggtgatgctgctggtgtaccgg
atgaagaagaaggacgagggcagctacacgctggaggaacccaaacaggccaccgtcacc
taccagaaaccagacaagcaggaggagttttacgcgtaa
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