KEGG   Austrofundulus limnaeus (annual killifish): 106516066
Entry
106516066         CDS       T06063                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:alim03009]
    106516066 (rrp9)
Ribosome biogenesis [BR:alim03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    106516066 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WD40_like
Other DBs
NCBI-GeneID: 106516066
NCBI-ProteinID: XP_013861696
UniProt: A0A2I4B1S5
LinkDB
Position
Unknown
AA seq 478 aa
MSSSFFIKTKXNPKLTQKGKDTAASKRKADGGSDGKSKFKKPNKHNEEISSDSETESPAV
SKKRQAKEELEYEETPQEKKLRLAKLYLDQLKEEEEKKAEYDSFETDLIAGRLQEEVLEQ
KGKLQRLIAKDIIPPDASEIRVLRGHKLPVTCLVITPNDKSIFSAAKDCSIIKWDIESGR
KLHTIHGGRKGTEERHVGHTAHILCMAISSDGKYLATGDMNKLIMIWEAETCKHLYKFTG
HKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDSITGLDSLSRERCVT
AGGRDGTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSLSLWGVNKKKPLC
TVKRAHGCHGNPGLEQPHWVVSVXALQNSDTVASGSHNSQVSVWKCGQHYRGLELLFTVP
VSGFINTLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPQNAEENQDD
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcttcgtcgttctttattaagacaaaarcaaaccctaaattaacccaaaaagggaaa
gacacagcagcgtcaaaaaggaaggctgacggtggctccgatggaaagagcaaatttaaa
aaacccaacaaacacaacgaagagatttccagtgactcagagacagagagtcctgctgtg
tcaaagaagaggcaggccaaagaggagttggagtatgaggagacacctcaggagaaaaag
ctcagattagctaaactttaccttgatcagttaaaggaagaggaggaaaaaaaggctgaa
tatgactcctttgagacggatctgatcgcaggaaggctacaagaagaagtgcttgaacag
aagggaaaactccagcgtcttatcgccaaagatatcatccctccagatgcttcagagatt
agagtgttaaggggacacaaacttccagttacatgtcttgtcatcacgcctaatgacaaa
agcatcttctctgctgccaaagactgctcaatcattaaatgggacattgaaagtggtagg
aagctgcacacaatccatggaggaaggaaaggtacggaggaacgccacgtaggacacacg
gctcacattctatgyatggccatatcctcagatggaaaatatttggccactggagacatg
aacaaactgatcatgatttgggaggcagaaacttgtaaacatctgtacaaatttactgga
cacaaaggacctgtgtcgggtctttcgttcaggaaggggactcatgatctgtacagtgca
tctcacgatcgttcaataaaggtgtggaacgtagacgagaatgcgtatgtggaaaccctc
tttggccatcaggattcaatcacaggactggacagtttgagccgtgagcgctgtgtgact
gccggcgggcgggacggcactgtgagagtgtggaagatagccgaggagtctcagctggtg
tttcacggacacgaaggttcgattgactgtatccagctcataaatgaagagcacatgata
acaggagcggatgatggctcgctgtctctctggggcgtcaacaagaagaagcctctctgc
acrgtgaagcgggctcacggttgccacggcaacccggggctggagcagcctcattgggtg
gtctccgtckcggcccttcagaactccgataccgtcgcctcaggttctcacaactcccag
gtgagcgtgtggaaatgtggtcagcactatcgtggattggagcttctcttcactgtacca
gtgtccggtttcatcaacactctgaagttttcgagctctggtcagttccttgtggctgga
gtcggacaggagcacaggttggggcgatggtggcgactaaaagaagccaaaaatgggatt
tatattatcccgctgaaaagaaaacctcaaaatgcagaagaaaatcaagatgactga

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