Austrofundulus limnaeus (annual killifish): 106516077
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Entry
106516077 CDS
T06063
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106516077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alim02000
]
106516077
Transporters [BR:
alim02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
106516077
SSDB
Ortholog
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
106516077
NCBI-ProteinID:
XP_013861712
UniProt:
A0A2I4B1W1
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MWPLQEKGLGTPDVQYMVCAYTHYHYALTNTGSIFSKIKMNKNQNLQVRRDQDPENRPEP
ETHVRDQWASKMEYILAVAGHIVGLGNVWRFPYLCYKNGGGVFFIPYVLFLFTCGIPLFF
LETSLGQFTSQGGITCWRKICPLFEGLGYGSQVVVLYTGMYYIIILAWTLLYLFSSARSE
LPWVSCNNSWNTDACFEYGRNKTSPLYRNSTSSVVEFWERRILGLSDGIEKIGSVRWDLA
ICLLLVWVLCYFCVWXGVKSAGKVVYFTATFPYVILAVLLVRGLTLPGAKDGVLFYLYPD
PSRLIDPEVWMDAGSQIFYSYGVCTGVLTSLGSYNKYNNNCYRDCVHLCLLNSLTSFVAG
FAIFSVLGFMAKEQGVDISVVAESGPGLAFIAYPRAMALMPLPQLWAVFFFIMLILLGLD
SEFVYQESLVTTISDMYPSFFQNACRRKLLLLFICIGGFLVGLVMVTEGGLYVFQLFDYY
ACSGMALLLFAILQSVCVGWIYGADHHYDNIESMIGYRPWPFMKYCWKFFTPAICTFTFL
FSVVKHVPLKFNNTYEYPWWGYAVGGFFTLSSTLLVPLWMFYAIIITPGTLKQRLKHLCT
PAKDLPWATIKKTSNHEAFQTFTDLFTLRKKEDSGENKDRTQWSSVL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccttacaggaaaaaggtttggggacccctgatgtacagtatatggtgtgtgct
tatacacattatcattatgctctgacaaacactggttcaatcttttctaagattaaaatg
aacaaaaaccaaaacctccaagtaagacgggaccaggaccctgagaacagacctgaacca
gaaactcatgtcagggaccagtgggcctctaagatggagtacatcttggcggtggcggga
cacattgttggtctgggaaatgtttggaggtttccttacctctgctacaaaaatggagga
ggggttttctttattccctatgttttgtttttgttcacctgcggcatcccgctcttcttt
cttgagacgtcgttgggtcagttcaccagtcaaggtgggataacatgttggaggaaaatc
tgtcccctttttgaaggcttgggctatggaagccaagtggttgttttgtacactgggatg
tattacatcatcatactggcttggactcttctatacctgttttcttcagccaggagtgag
cttccatgggtgagctgtaacaacagctggaacacagatgcatgtttcgagtatggccgc
aataaaacgtccccactgtacaggaattccacgtcttcagtcgtagagttttgggagaga
agaatattggggctgtcrgatggaattgagaagattggaagtgttcgttgggacttggcc
atctgtctacttttggtctgggtgttgtgttatttctgtgtctggaakggagtcaagtct
gcaggaaaggtggtgtacttcactgccacttttccatatgtgattttggcagtgttgctg
gttcgaggtcttacattaccgggagccaaagatggagttcttttctacctctacccagat
ccatctcgcctcattgacccagaggtttggatggatgcaggaagtcagattttctactcc
tacggtgtttgcactggtgtyctgacatcattaggtagctacaacaagtacaacaacaac
tgctacagagactgtgttcatctgtgcttgttaaacagcttaaccagctttgtagctggc
ttcgccatcttctctgtgctcggytttatggccaaggagcagggtgtggatatatcagtg
gtggctgaatcaggcccaggcttggcatttattgcttatcctcgagccatggctctgatg
cctcttcctcagctgtgggcagttttcttcttcattatgctcattcttttaggattagat
agtgagtttgtatatcaggagtccttggtcaccacaatctctgacatgtatccctccttt
tttcaaaacgcctgtcgacgtaaacttcttcttttattcatttgtatcggaggtttcctc
gttggtttggtgatggtaactgagggaggcctttatgttttccagctgtttgattactat
gcctgcagcgggatggcactgttgttatttgctattcttcagtctgtctgtgtcggatgg
atctatggtgcagatcaccactatgataatatagaaagcatgattggctatcgtccctgg
ccttttatgaaatactgttggaagttcttcacaccagctatctgcactttcacatttctg
ttctctgtggtcaaacatgtgcctctcaaattcaacaacacctatgaatacccatggtgg
ggwtatgctgttggaggatttttcacactatcttcaacattattggtacctttatggatg
ttttacgccataatcatcactccaggaacactaaaacaaagattaaaacatctttgcact
ccagcaaaagacttaccttgggccacaataaagaagacatcaaaccatgaagcttttcag
acgttcacagatttgttcacactgcgcaaaaaagaggattcaggtgaaaataaggacaga
actcagtggtcatctgtactttaa
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