Austrofundulus limnaeus (annual killifish): 106516185
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Entry
106516185 CDS
T06063
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04260
Cardiac muscle contraction
alim04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106516185
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
106516185
04261 Adrenergic signaling in cardiomyocytes
106516185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106516185
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106516185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
WAK_assoc
zf-C4pol
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
106516185
NCBI-ProteinID:
XP_013861858
UniProt:
A0A2I4B2B3
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MEGNCRIPFLXTCSSSSFFLLWISIGLNWSEGSAGSQQGIPLSVVKLWASAFGGEIKSLS
AKYSGSQLLQKELWSITAPRSGANSSSETSPPVRISSRISPKSSAACLWEESAGNRGSPR
KYGESAQTAFRKRLQAQNPSSSCPEKFKEPEKSFRVEEIDGVKLVKNLAVKMEEMFRKKA
EATRRLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGGEFILEPNDHFNNL
SVNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQ
YPGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSIL
DTLGDDDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEALT
EAFSILNDFNQTGHGSVCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAF
ADNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALTH
AYKLNDKSGPTLTTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGY
AFAITNNGYILTHPDLRPLYQEGQKRRKPNYSSVDLSEVEWEDKDEILRNAMVNRRTGTF
SMEVKRTVDRGRRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSMDAGLRDLE
QPDVALADEWTYCNTEEKHEHRHLSQIQAIKLFMTGRKSHFKCDRELIQEVLFDAVVTAP
LKNYWNSLAQNKSENPDKGVEIAFLGTRTGLSRTKQFVPTDQLSNQDLLTAEDKEGVFNA
DHFPLWYKRAAELVPGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGLQMKL
EYFQRKFWTACRQCTALDGKCSISCDSEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGA
VMNKLLQMGCFKRITLYDYQALCREYAGSSDSARTLSDPFSVVKWLLTELIIFLLEFNLY
SWWNVDLSVKAQRSGKTMMVPCDTEYPAFVSERTIKETTGNIECDGCVRSFVIQQIPSSN
LFMVVVDNKCDCSSIPPVTMDPIEIMYNESLKCDRLKLQKDRKKPESCHPFHPEENAMEC
GSASRLSNCLAINLLSLVAASISR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaactgcaggattccctttttgcwcacgtgcagcagcagcagcttcttcctg
ctctggatctccatcggcttaaactggtctgaggggtctgcggggtcccagcaagggatt
cctctgtcagtagtaaagctttgggcctctgcatttggtggagaaattaaatcgctttct
gcaaaatattctggatctcagttgttgcaaaaggagctgtggtccatcacagccccacgt
tcgggggccaactccagttctgagaccagcccccctgttcggatcagcagccggatcagt
cccaagagctcagctgcttgtctgtgggaggaaagtgccggcaacagaggaagtcctcga
aagtatggagaaagtgcgcagactgcattcagaaagcggctgcaggctcaaaacccaagc
tcgtcgtgccctgagaaattcaaagaacctgaaaagtcattcagagtggaggagatcgat
ggcgtgaagctggttaaaaacctggcagtgaagatggaggagatgttccggaagaaggca
gaagccaccaggcggctggtggaggcggcggaagaggcgcaccatcagcatgaagacaac
ccagacctgcagtatgagtacttcaacgctgtgctgatcaatgaagtggacgaggaaggc
aacaacgtggagctgggaggcgagttcatcctggagcccaacgaccatttcaacaacctc
tcagtcaacctgagcctcagtgtggtgcaggtgcccaccaacatgtacaacaaagatccc
gacatcgtgaacggggtctactggtccgaggccttgaacaaagtcttcgtggagaacttt
gaaagagatccgactcttatctggcagtactttggaagcgccaaaggttttttcaggcag
tatcccggagtaaagtggcatccagacgaacatggcgtcatcggcttcgactgcagaaat
cggaagtggtacatccaggcagcaacgtcccccaaagacgtggtgattttagtcgatgtc
agtggaagcatgaaggggctgaggctgacaatcgccagacagactgtttcctccatcctg
gacactctgggggatgatgacttcttcaacatcattgcatacaatcaggagatccactat
gttgaaccttgtctgaacggtactctggtccgggccgacaggacaaataaagatcatttc
cgtgaacatctggacaagctgtttgccaaagggattggacttctgggtgaagctctgacc
gaagcgttcagcatcctgaacgattttaatcagacaggacatggcagcgtgtgcagccag
gccatcatgctcgtcactgacggagcgacggaaatgtacgatgatgtttttgagaagtac
aactggccagaaagaaaagtgcgcatattcccctacctaattggacgggagtctgcgttt
gctgataacctgaaatggatggcctgtgccaacaaagggtatttcagtcagatctccact
ttagctgatgtgcaggagaatgtgatgaggtatcttcatgtcatgagtcgtccaaaggtc
atcgaccacgaacacgacacggtttggacagaagcttacgtggacagtgctcttactcac
gcatataagcttaatgacaaatcaggtccaactctgacgacgacagtggccatgcctgtg
ttcagcacaaagaacgagacgaagaatcagggtattctgttgggggtcgtaggaacagac
atccctctgcaggagctgatgaagctcatcccaaaacatatgttaggaatccacggytat
gcatttgccatcactaacaacggctacatcctgacacatccagacctcaggcctttgtat
caggaaggtcagaagaggaggaagcccaattacagcagcgtggatctgtctgaggtggag
tgggaggacaaagatgarattctgcgcaacgccatggtaaacaggaggacggggactttc
tctatggaggtgaagaggactgtggacagagggaggcgtgtgctcaaaatgcacaatgac
tattactacactgacatcaaaggaactccgttcagtgttggagtagctctctcaagaggt
catgggaaatatttcttcagaggaaacgtgtccatggacgcagggctccgtgatctggaa
cagccagatgtcgccttggcagatgaatggacctactgcaacacggaggagaagcacgag
caccgtcacctgagccagattcaagccataaagctctttatgacgggccgcaaatcacat
ttcaaatgtgacagagagttgatccaggaggtgttgtttgatgcggtggtcactgctcct
ctgaagaactactggaatagtttggctcaaaacaaatcagaaaacccagacaaaggagtg
gagatcgccttcctgggaacgcggaccggtctgtcgagaaccaaacagtttgttcccact
gatcagctgtccaatcaggacctgctgacggcagaggacaaggagggggtgttcaacgca
gatcacttccctctgtggtacaagagagccgcagagctggtccccggcacgtttgtctac
tccatccccttcagcacagcgttagaaaacaagagtgtggttttggccagcacagccatt
cagctcctcgatgacagaaaatctccaattgttgctgctgtaggactccagatgaagctc
gagtattttcagaggaagttttggacggcctgcagacagtgcacggctctggatggaaag
tgcagcattagctgtgattctgaggacatcaactgttacctgattgacaacaacggcttc
attctggttacagaagaacagtctcagacaggactcttcttcggagaggtggagggagct
gtgatgaacaaactgctccagatgggatgttttaaaaggatcaccctgtatgactatcag
gctctttgcagagagtatgctgggagcagcgacagcgcacgcactttatcagatcctttt
tctgtggtcaagtggctgctgacggaactcatcatttttctgctagaatttaacctgtac
agctggtggaacgtcgatctgtcagtgaaagctcagagatctggcaaaaccatgatggtg
ccttgtgacacagaataccctgcctttgtctccgaacgcaccatcaaagaaacgacaggg
aacatcgagtgtgacggctgcgtcaggtcttttgtcatccagcagattcccagcagcaac
ctgttcatggttgttgttgacaacaagtgtgactgcagcagtattcctccggtaaccatg
gatcccatcgagatcatgtacaacgagtcgttaaaatgtgacagactgaagcttcagaag
gacagaaaaaagccagaatcgtgtcatcctttccaccctgaggaaaatgccatggaatgt
ggctcagcctctcgtctctccaattgtctggcgataaacctgctgtctctggtagcagca
agcatcagcaggtga
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