Austrofundulus limnaeus (annual killifish): 106516245
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Entry
106516245 CDS
T06063
Symbol
itga1
Name
(RefSeq) integrin alpha-1 isoform X1
KO
K06480
integrin alpha 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04810
Regulation of actin cytoskeleton
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106516245 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106516245 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106516245 (itga1)
04810 Regulation of actin cytoskeleton
106516245 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106516245 (itga1)
04515 Cell adhesion molecules [BR:
alim04515
]
106516245 (itga1)
04090 CD molecules [BR:
alim04090
]
106516245 (itga1)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106516245 (itga1)
Cell adhesion molecules [BR:
alim04515
]
Integrins
Integrin alpha subunits
106516245 (itga1)
CD molecules [BR:
alim04090
]
Proteins
106516245 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_3
FG-GAP_3
Integrin_A_Ig_1
DUF1775
MFS_Mycoplasma
Motif
Other DBs
NCBI-GeneID:
106516245
NCBI-ProteinID:
XP_013861958
UniProt:
A0A2I4B2L9
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MLQLCLTAAAAVVLLTCVLSFNVDQKNSLSFEGPLDDMFGYTVQQFENSEGKWVLIGSPH
SGQPLNRTGDVYKCPVGRRNNTCVKLKLPDNTTIKNVVEIKENMTMGTTLVTNPNGGFLA
CGPQYGYMCGLQQYITGVCANVSSSFQILNSIAPEVQSCSNKLDIVFVLDGSNSIYPWSS
IVDFMCRFLEKTHFDPQQSQVGIVSYGEDVTHQVNLSQFHNNSQLLEFVKALPQHGGTKT
HTFLAIETARKEAFTPERGARPDAKKVMVILTDGESHDNHKQDAVIRDCENDGILRFGIA
VLGYYRRSNGSEEQVEKFVNEIKSISSKPVHDHFFNVSDEFALVNFADTLGEKVFALEAT
SGNHTSSFEMEMSQTGFSAHSSKEGLLLGAVGAYDWNGTVVMQTDKETIIPKKNQFYDPK
HEAGYEGLAGYLGYDVQSASTHKGVLYISGAPRYNHTGRVVIYRIKEGNIVVSQILKGEQ
IGSYFGSVLQTVDIDRDSLTDLLLVGAPMYMGSERDEQGQVYVYKLKRGQFEHEFTLKPV
NQTCCVAQSAGCSVKNEPCGARFGTAIAAVSDLNLDGYNDVVIGAPFENDHRGAVYIYHG
DKKSLKKQFVQHIPAGGDGEKMKFFGQSIHGVMDLNGDGITDVTIGGLGGASLFWTRDVA
ELHANMTFNPVKINLQQSQYPCNGSACVNITVCYRYLVKSDKKDPNSPAEVRYTITLDAL
RTKSRAFFVEQGTEKSERKITKIITIKDNEKKCLMEKFKMLPRPDFRDPLLVSLEFGLVK
EDQGPVLDENLPRSINKTIPLMDCGGDGKCVSELSLTAEPSVKSMLIKVNARDKIDVNIR
VRNSRDSAYNTKVNISFTPNINYVKVEPEKDCTLNNTKVECAVGYPFLGQNAEEIFKVRF
ETNPKHIQGEIQVNLTATSDSEELSSSDNDVKISIPVKYEPGVIFRVNPVDAHIIVKDGD
QYALKHNDSKLTWEEVNVNYTVEMSGDVMTPPLNLTVSFPRLSPLKNKLLDLTKFTASPG
VNCAKGHLDESNPSVKALKPKKETLSVFLLQCEQAECALFDCFIPETKMSQVNITFRVWK
PTFMEGEFSSLYMTVNGTLRLSNEKLYELSSNDKHRSVRIPVSKDTVEGIPIWIIILSIL
IGLLILALVIFLLWKLGFFKRKSREDYSKEDMAD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctctgtctgacagcagcggctgctgttgtgctgctgacttgtgtgttgtcc
ttcaacgtggaccagaagaacagcttgtcctttgagggtccactagatgacatgtttggc
tacacagtccagcagtttgagaacagcgagggaaaatgggttctgattggatcccctcat
tcaggccagccactgaaccgaacaggagatgtttacaaatgtcccgtgggaaggaggaac
aatacgtgtgtcaaactgaagctaccagacaacaccactataaagaatgtggttgaaata
aaggaaaacatgaccatgggaaccacactggtgaccaatcccaatggaggatttctggca
tgtggccctcagtatggatacatgtgcggcctacagcagtacatcaccggggtttgtgct
aacgtcagctcctcctttcagatcctcaactccatagctccagaagtacaaagctgttca
aataaactggacattgtgtttgtgctggatgggtccaacagtatctacccatggtcaagc
attgtcgactttatgtgccgtttcctggaaaaaacccattttgatcctcaacaatcacaa
gtgggcatagtatcttatggtgaggatgttactcaccaggtcaacctcagccagttccat
aacaattctcagctgctggaatttgtcaaagcacttcctcagcatggaggtacaaagacc
cacaccttcttagccatcgagactgcaaggaaggaggcatttaccccggagaggggtgca
cgacctgatgcaaagaaagtcatggtgatactgactgacggagaatcacatgacaatcat
aaacaagatgcggtcatccgcgactgtgagaatgatggaatcttgaggtttggcattgct
gttctgggatactacaggcgtagcaatggaagtgaagagcaggtggagaagtttgttaat
gaaattaaatcgatttccagtaagccagtacacgatcacttcttcaacgtatctgatgag
tttgccttggtgaattttgcggacacgctgggagaaaaagtctttgccttggaagcaacg
tctgggaatcatacttcctcctttgagatggagatgtcccaaactggatttagtgcacat
tcctctaaagagggtttgttactgggagcagttggagcgtatgactggaatggaacggtg
gtgatgcaaactgacaaagaaaccatcatccctaaaaaaaatcagttttatgatccaaag
catgaggccgggtatgaaggactagctgggtaccttggatatgatgtccagtctgcctcc
actcacaaaggagttctgtacatcagtggagcaccgcggtacaaccacacaggccgtgtt
gttatctaccgtataaaagagggcaacatcgttgtttcacaaatactgaaaggagaacag
attggttcctacttcggcagcgtcctgcagactgttgacatcgatagagattccctcacg
gacctccttcttgttggagctccgatgtacatgggctcagaaagagacgagcagggacaa
gtctacgtctacaaactgaaacggggccagtttgagcatgagtttaccttgaagcctgtc
aaccagacgtgttgtgttgcccagtcggctggctgctccgttaaaaacgagccgtgcgga
gctcggtttggtactgccatagcagcagtgtctgatctcaaccttgatgggtacaacgac
gttgtgataggtgcgccatttgagaatgaccacagaggagctgtttacatctaccacgga
gacaagaaatccctgaaaaagcagtttgtacagcacattcctgcaggtggagatggtgaa
aagatgaaattctttggtcagtccatccacggggtgatggatctgaatggagacggcatt
actgacgttaccataggaggccttggaggggcttccctgttctggaccagagatgttgca
gagctgcatgctaacatgacttttaaccctgttaaaataaacctgcagcagtctcagtac
ccatgtaatggatctgcgtgtgtgaacatcacagtttgttatcgctaccttgtaaaatct
gacaagaaggatccaaactctcctgcagaagttcgttatacaattactttggatgctctg
cgaacaaaatccagggccttctttgttgaacaggggacagagaaaagtgagcgcaagatt
actaaaatcatcaccatcaaagacaatgagaagaaatgcctgatggaaaaatttaagatg
ttgccacggcccgacttcagggatcctctcttggtgtctttggagtttggactagtcaaa
gaggaccaaggtcctgtcctggatgaaaatcttcccagatccatcaataagacaattcct
ttgatggactgcggaggtgacggaaagtgcgtcagtgaactctcgctcaccgcagagccg
agcgtgaaaagcatgctgattaaagtcaacgcacgagacaagatcgacgtgaacatccga
gtcaggaacagcagagacagcgcctacaacaccaaagtgaacatcagcttcacaccaaac
atcaactatgttaaagtagagccagagaaagattgcactctgaataacacaaaagtggag
tgtgctgttggatatcccttcctgggacaaaatgcagaggagattttcaaagtcaggttt
gagacaaaccctaaacacatacagggagaaatccaagtcaatctgacagctacaagtgac
agtgaagagttgtcatcttctgacaatgatgtcaaaatctccatccctgtgaagtacgag
cctggagtcatattcagagtgaatcctgtggatgctcacattatagttaaagatggtgac
cagtatgctttgaaacacaatgacagcaaactgacttgggaggaagtcaacgtcaattat
acggtggagatgtcaggcgatgtgatgactccgccccttaacctcacagtgtcgtttcct
cggctgtcgcctctgaagaacaagctactcgacttgaccaaattcaccgccagcccaggg
gttaattgtgccaaaggacatttggatgaaagcaacccttctgttaaagcgctcaaaccg
aaaaaggaaacacttagtgtgtttttgctgcaatgtgaacaagcggaatgtgcgctcttt
gattgtttcatccctgaaaccaaaatgagtcaggtcaacattactttcagggtgtggaaa
cctacatttatggagggtgagttttccagtttgtacatgacggtaaacggcacactgagg
cttagcaatgaaaaactctacgagctaagcagcaatgacaagcacagaagtgtgagaatc
ccagtttcaaaagacacagtggaaggaatccccatttggatcatcatcctcagcatcctg
ataggactgctgatcttagcacttgtcatctttctcctgtggaagttgggcttcttcaag
cggaaatctcgagaagactattcaaaggaggacatggcggactga
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integrated database retrieval system
