Austrofundulus limnaeus (annual killifish): 106516383
Help
Entry
106516383 CDS
T06063
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106516383
Ion channels [BR:
alim04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106516383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
106516383
NCBI-ProteinID:
XP_013862165
UniProt:
A0A2I4B328
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFPPELLTAIQEGKIELLSGLLRTGDGIIRQLDESEDRQWREA
LNLSIRLGSEDAMDALLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYEIVSMLTQKGHGIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSDDAMLSAFSLSKELRKLSQKEPEFKPQYL
SLENLCQEFAVELLGMCRNQSEVTTILNSCGDDSRDSFDEQAFEEGIPPLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGHLEGWRGSRIAWKLLVSVGIFLTMPFLCLVYWIAPKSKPG
KLLKIPVIKFLLHSASYLWFLITLLGESITMEMYREKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFTLRLVIMLKGYFLCQDQSSNEDCXYF
TQTVRDQWHQEDPQFISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPNLGRFNETFKFLYWTMFGVANQDYVDMPDFVLAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAAFYVLRGIFRRFCCCCNRNSEQKYPPLASMSSDKGTEDSQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELNKAVSRMHGEMKMIQQLLVTDGHVSSNALTND
GASVLGKYIIGAKNNFRGFNSSHDDKHASLKVSVHHGAEKADHDAQQETDKLSQVDEHEE
ELMQVTDCEVVNMEEGQAKSVRDAEKREPVEEQQSENSNQEXAARGRSFDDVEGKVETAR
SEEEVNAGSRVTETHTETEAEPTESAAVGCEVTDTKKLINKFKDMELMERHTETGRMKGN
RYEKKARERDGQSGNKEVIPSPTGSSSSHDTGFGSQEGEGTIDGAPVI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctcacgccggaacaatggcgcgagataatgaacaagaagatgcgcttccct
ccggagctcctcaccgccatccaggaagggaagatcgagctgcttagcgggctgctgagg
acaggcgatggcatcatccgtcagctggatgaatctgaggatcgtcagtggagagaggct
ctcaacctctctatccgcctgggcagtgaggacgccatggacgctctcctgcagggggtc
aagtttgacttcaggcagattcacgaggccctgctagtcgctgtggacacyaaccagccc
agagtggtgaagcgtctgttggatcgtttggaccaggagaaaggcaacaagatggatgtc
cgatccttctcccaggcgatctttgaccgctccattgacaactcccagtttgcccctggt
gtgacccctttgactctagcctgtcagaaagacctgtatgagatagtctccatgctcacc
cagaaaggccacggcatcccgtggccacacaagatatcctgtgcctgtctggagtgtcgc
aatggccggcagtatgacctgctcaagttctctttgtctcgcatcaacacctaccgtggc
attgccagccgggcctatctgtccgtcacctctgatgaygccatgctcagcgcttttagt
ctcagcaaagagctccgcaagctgtcacaaaaggagccagagttcaagcctcagtacctg
agccttgaaaacctctgtcaagagtttgctgtggaattgttggggatgtgccgcaaccag
agtgaggttaccacgatcctgaacagctgcggcgatgacagtcgtgattcctttgatgag
caggcctttgaggagggaatacctcctttgtctcgtttgaggcttgctgtcaactacaac
cagaagcagtttgtggcacacccgatctgccagcaggttttgtcatcaatttggtgtggg
cacctggaaggttggagaggcagcaggatagcctggaagctcttggtctccgtcgggatc
tttcttaccatgccctttctttgcctcgtctactggatagcacccaaatcaaagcctgga
aagctgcttaagattcccgtcattaagttcctccttcattctgcgtcctacctgtggttt
ctcatcactttgctcggagaatcgataaccatggagatgtaccgggagaagtttgcttcc
cggcagcaaaacatcctgcacagctccttccacatggtgtgggtggttggcttcttctgg
tatgagtgcaaagaggtgtggatcgagggactgcgcagttacttcctagactggtggaac
tgcttggacgtgatggtactcagcatgtacttggcatcctttacgctgcgattggtcatc
atgctcaaaggctacttcctctgccaggatcagagcagcaatgaggactgcrtctacttc
actcagactgtgcgtgaccagtggcatcaggaggacccacagtttatttctgaggtgctg
tttgctgtgaccagcatgctgagcttcacccggctggcctatatcctgcctgcacacgaa
tctctgggaacgctacagatatcaatagggaagatgattgatgacatgatgaggttcatg
ttcatactgatgataattgggacggccttcctctgcggcatcaacaacgtctacgttcct
tatgtcatctctccaaatcttggcaggttcaatgagaccttcaagttcttgtactggacc
atgttcggggtggccaaccaggactacgtggacatgcctgattttgtcttggccgaattt
gtcggaagagttctgtayggcatcttcaccctcgtcattgtcatcgtcctcctcaacatg
ctcattgctatgatyaccaactcctttcagaaaattgaggatgatgcggatgtggagtgg
aaatttgcccggtccaagctgtacctcagttacttcagagagggcctcaccatgcccgtg
cctttcaacatcattccttctcccaaagctgcattttatgttttaaggggtatcttcagg
cgattctgctgctgctgcaacaggaactcagagcagaaatatccccctctagcctctatg
tccagtgataagggcaccgaggacagtcagctcccttaccggcagcaggtgatcagagct
ttggtgcagcgctacatcgagtcagctcgcagggagtttgaggagaccaagaggaaagat
atcggaaatcggatcactgagctgaacaaagcggtctccaggatgcayggtgaaatgaag
atgatccagcagctgctggtgactgacggacacgtttcgagcaatgcgctgaccaacgat
ggcgcctccgttctggggaaatacatcatcggcgccaagaacaacttcagaggtttcaac
agcagccacgacgacaaacacgcatccctgaaagtgagcgtgcaccacggagcagaaaag
gctgatcacgacgcacagcaggagacagataaactgagtcaggtagatgaacatgaggaa
gagctgatgcaggtgactgattgcgaggtggtcaatatggaggaaggccaagccaaatct
gtgagggatgcagagaaaagagagccrgtagaagaacagcaaagtgaaaacagcaaccaa
gaggwggcggcaagagggagaagttttgatgatgtagaaggaaaggtagaaaccgcaagg
agtgaagaggaggtcaatgcggggtcacgggtgacagaaacacacacagagacggaggct
gagcccacagagagcgccgcagtcggctgcgaagtgacagacaccaagaaactaatcaac
aagttcaaagacatggagctgatggagagacacacggaaacaggacggatgaaggggaac
agatatgagaagaaagccagggagagagatggacagagtggaaacaaggaagtgatcccg
tctccaacaggaagcagcagctcacacgacacgggcttcgggtcacaggagggggagggc
accatcgatggggcaccagtgatttag
DBGET
integrated database retrieval system
