Austrofundulus limnaeus (annual killifish): 106516406
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Entry
106516406 CDS
T06063
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106516406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106516406
03036 Chromosome and associated proteins [BR:
alim03036
]
106516406
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106516406
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106516406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106516406
NCBI-ProteinID:
XP_013862206
UniProt:
A0A2I4B3A2
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MSALSSSSSKLNVLVNRLHEYLAHSNTDDDNDMSEDSSDRTKKHCSVGNSLSHSTAEACL
DSRYSRRKPSVVIKHSGLDESGDSNASEDFEFPVSSNGHIDVTRLPKGTVLVRPEPVDIM
RDDFRGPEFRSRKPNVLRKEFSRRRGGEQPVGIVCCTACGRQVNHFRKDSLYRHPVLKVL
ICKACYNYYSSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKELSG
ILESKWYCYVCSPEPLFDLVMACDSVLENIDRLWCQQRKKNRVEPGKAQLYHMSPHLPQN
ISLDKWDHSGMDGNVVFNYNTLQVSKDITKKAKHLVDSTNTLNKTFLXLIQEITTSKKTP
GVRIMYLKSFVAVVKGLRKSLAALEDSLKEEFSDLNLLCNWEKLFSNDTESDVAAGDVEL
DISDGRCLRELQKLATEHFEDNDSDCKGNVHRPTSTDCSRKNMDADLKEARCRAQKIGLN
PSANQADVVKKLVVQLTPVAMEQEPXSHAPKLEEDFQKENKAKGEHASEAEETRALSPKA
DSKMSSDCSSAPLFLEEEQGNRRSPRVKTTPLRRPSDVKAKTPLSAGDSDSDSEAEGTPD
TVTATNKEQNLIGERDDSDSDEVPAALLERAAMPQSSDEPQSDDERGQASSNKVAKKCLF
WLTKNSPMSPEKMRRKRKLLDRSSESESSNRLIINTQQESETDSSSDEDSQKKIQHLSTV
RSIGKPHLVKREEEGVTRKQRRLQAGKSKAEPHQEASDSSSSFSDDDDDSXSDGSVQKMK
PITENVSSLGLAAFHQSSGDEELSGPSWAAEDDDDPENRIAKKMLLAQIKANFSSDGDIS
SDDETKEDESESEVDDDKQGDEDNETNQNGEEIASESSDSASDDPKLRHHLLRHKLTLDK
ETTGNKAEPENEAGQQKTQRKAKRKQLFSDCENSANSCEDGMSEELSESEVETDECELQS
LNSETNEDEATSSHREKNEVQCIWLSDTSSEQSNKEDSNEGENSQTKGTPKGRKKIRKIM
EDEDLRAETQEALKEEEERRKRLASRDQQMEDRKEVIGDEESQSCLVTTKLVLDKDEETK
MPLVQVHRNLVTQLKPHQVDGVQFIWDSCCESVRKANSSPGSGCILAHCMGLGKTLQVVA
FLHTVLLSSKLNFKTALVVCPLNTILNWVSEFKKWQDNIEDDKVKVTEVATLKTLPERLS
ALRKWQRNGGVLIIGYDMYRILSQGHKIENDEEKELLKSTLVDPGPDFVVCDEGHILRNE
ASRISKAMNTIKTQRRVVLTGTPLQNNLVEYHCMVSFIKKNLLGSLHEFRNRFINPIQNG
QCADSTPKDVRVMKKRAHVLHEVLAGCVQRRDYSELTQFLPPKHEYVLTVRITPLQYKLY
RHYLDCVSAGGAEVSTTKVRTGANLFKDFQILGRIWTHPWCLKLSDLSKENKQRHLDERN
QFKAAAQLMNVETIVAKSRLKDEGKVVTNSENGTMTVDAPKDERVVEGRKSANSLNSQTA
GKAWYKNFLSESDSKILEHSGKMMLLFEILQMAQDLEDKVLVFSQSLITLNLIEAFLAAS
HRARDPSKLAGSWIKNVDYYRLDGSTTAPLRKRWAEKFNNTANVRGRLFLISTRAGSLGI
NLVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQS
LSSRVVDQQQIERHFTLNELTELYTFEPDLLDDPNSKKSRRPTPILPKDSILAQLLQTCK
DQIISYHEHESLLDHKEEEELSEAERRAAWAEFEAESNTASLPVSSPKDSLDKHTNEKLL
QMLNKCRAQVSLAFSTLQKMRSYTIEEYKQRLQQQYPLLPELELQMKAGYWKQCDDKRRD
VTQAYYQEALTQQQSLTLRIQALLNKRRKLVIPTNVRTTTQPGQTG
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctaagctcctcttccagcaaactgaatgtattggtcaaccggcttcatgag
tacttggctcattccaacactgatgacgacaatgacatgtctgaggattccagtgatcgg
acaaagaaacactgctctgtgggaaactctttaagtcattccactgcagaggcatgtctg
gatagtagatactccagaaggaaaccttcggttgtcataaaacactcaggcctggacgaa
tctggagactcaaatgcaagcgaggactttgaatttcctgtcagttctaatggtcacatt
gatgtcactaggctgcctaaaggcacagtgctggtcagacctgaaccagtggacattatg
agagatgacttcagaggtccagagtttcgcagccggaaacccaacgtactgcggaaagag
ttctcaaggagacgtggaggagagcaacctgtgggaattgtgtgttgtactgcgtgtggc
cgrcaagttaaccacttccggaaggattcactttatcgacatccagttctgaaagtactt
atttgcaaggcttgttacaattattattcaagtgatgacatcagcaaggacggagatgga
atggacgagcagtgcagatggtgtgctgaaggtggaaacttaatctgttgtgactactgc
agcaatgctttctgcaagaaatgcattctgagaaacctggggaggaaggaactatctggc
atcctggagagcaagtggtactgttacgtgtgcagtccagagcctctttttgacctggtg
atggcttgcgacagcgttctagagaacatagatcgcctatggtgtcaacagagaaagaag
aaccgagttgagccgggtaaagcacaactgtaccacatgtcgccacacctgccgcagaat
atttctytggataaatgggatcacagtggaatggatggaaatgtggtcttcaactacaac
actctgcaagtttccaaggacattaccaaaaaggccaaacatctggtggactcgacaaat
accttaaacaaaacatttcttrgtttaattcaagaaataacaacatcaaagaaaacacca
ggagttcgcattatgtatttgaagtcatttgtggcagttgttaaaggcttgcggaagtct
ctcgcagccctggaggacagcttaaaggaagaatttagtgacttgaatctgttgtgcaac
tgggaaaagctgttcagcaatgatactgaatctgatgtagcagcaggagatgttgagctg
gatatctctgatggaagatgcttgcgygaattgcagaaactggcaacggagcattttgaa
gataatgattctgactgcaagggaaacgtacacaggcctacttcgactgactgctccagg
aagaacatggatgcagatttgaaagaagctagatgtcgagcacaaaagatcggtctgaay
ccttctgcaaatcaagctgatgtggttaaaaaactggtagtacagcttacacctgtagcc
atggagcaggagccgtygtcgcatgctccaaagttagaggaggatttccagaaggaaaat
aaagcaaagggagaacatgcatcagaagctgaggaaactagggctttaagtcctaaagct
gacagcaaratgagcagtgactgctcaagtgctcctctcttcctagaagaggaacaaggc
aatagacgatctcctcgtgtgaagacgactcctctgcgccgaccaagtgacgtcaaggcc
aaaactcctctttctgcaggcgacagtgacagcgactccgaagctgaggggacgccggac
acagtaacagcracaaacaaagaacaaaatttgattggagaaagagacgactctgattcg
gatgaggtccctgctgccctgctcgaacgagctgctatgccgcaaagctcagacgaacct
cagagtgatgatgaaaggggtcaagcatcgtcaaacaaagtggccaagaaatgtctgttt
tggctcaccaagaacagccccatgtcaccagagaagatgcggcgaaagcgcaagttgctc
gaccgctcctctgagtccgaatcaagcaacaggctgatcataaacacgcagcaggaaagt
gagacggattcctccagcgacgaagactcccagaagaaaatacaacacttgagtacagtg
aggtcaatagggaagcctcaccttgtcaaaagagaagaggaaggtgtgactagaaagcag
agaagactgcaagctggcaagtctaaagcagaacctcatcaggaagcatctgattcttca
tcctcatttagcgatgatgacgatgactctgkgagtgatggaagtgttcagaagatgaag
ccgatcacagaaaacgtgtcctcacttggactagcagcattccaccaatcatcaggggat
gaagagctgtccgggccctcatgggcagcagaagatgatgatgatccagaaaatagaatc
gctaagaaaatgctgttggcccaaattaaagccaacttctcctcggatggtgacatttct
tcggatgatgaaacaaaggaggatgagtctgagtcagaagtcgatgacgacaaacaaggt
gatgaagataatgaaacgaatcaaaacggagaggaaattgcttcagaatcatcagatagt
gcgtctgacgaccccaaactcagacaccatcttctccgccacaaactcacattagacaag
gaaacaacaggcaacaaggcagagcctgaaaatgaagcaggacagcagaaaactcaaaga
aaagcaaagaggaaacagctgttttctgattgtgaaaatagtgcaaacagttgtgaagat
ggaatgagcgaggagctgagcgagtcagaggttgagactgatgaatgtgaactgcagagc
cttaattcagaaacaaatgaagacgaagcgacgtctagtcacagagagaagaatgaagtg
cagtgcatttggctgtctgacaccagcagtgagcagagtaacaaagaggattcaaatgag
ggagaaaacagccaaaccaagggmaccccaaaaggccgcaaaaagatccgtaaaattatg
gaggacgaggacctgcgtgctgagacccaggaagccctcaaggaggaggaggagagacgc
aagcgtttggctagcagagaccaacagatggaggacaggaaagaggtaataggggatgag
gaatctcagtcttgtcttgtcacgaccaagctggtcctggataaggatgaggagaccaag
atgccacttgttcaggtgcacaggaacctggttacacagctgaaacctcaccaggtggac
ggtgtccagttcatctgggacagctgctgtgagtctgtgaggaaggccaactcctctcct
ggatctggctgcattctggcacactgcatgggactgggaaagactctgcaggtggtagca
tttcttcatacggtgctgctctcatcaaagctgaacttcaaaacagccttggtcgtgtgt
ccgcttaataccatcctcaactgggtcagtgagttcaagaaatggcaagacaacatagaa
gatgataaagtcaaggttaccgaggtggctacgttaaagactctcccggagcgactcagc
gctctgcggaagtggcagagaaacggaggtgtgctgataatcgggtacgacatgtaccgc
atcctgtctcaaggccataaaatcgaaaacgacgaggagaaggaattgttaaagagcaca
ttagtggatccaggtccggactttgtggtttgtgacgaggggcacatccttcgcaatgaa
gcctccaggatctccaaagctatgaacaccatcaagacccaaagaagggtggtgctaacg
ggtacaccacttcaaaacaaccttgttgagtaccactgcatggtgagtttcatcaaaaag
aatctgctgggctccctgcacgaatttcggaaccgcttcattaaccccatccagaacggc
cagtgtgccgactccactccgaaagatgtcagggtcatgaagaagagggcacacgtgctt
catgaagtgttggctggttgtgtgcagagaagagattactctgagttgactcagtttctg
cctcccaaacacgagtatgtgctgacagtgaggatcaccccccttcagtacaaattatac
cgtcactacctcgactgcgtctcagctgggggagctgaagttagcacaacaaaggtgagg
accggtgcaaacctctttaaagatttccagattcttggccgaatctggactcacccgtgg
tgccttaagctcagcgacctcagcaaagaaaacaagcagagacatttggatgagaggaat
caatttaaggcagcagctcagctgatgaatgtagagacgattgtggctaagagcagactc
aaagacgaaggaaaagtagtgaccaacagcgaaaacggcacaatgactgtcgatgccccc
aaagatgaacgagtggttgaagggaggaaatcagcaaacagtttgaattctcagacagca
ggtaaggcctggtacaagaactttctgtcggaaagcgattctaaaatcctggaacattcg
gggaaaatgatgctgttattcgagatccttcaaatggcccaagacctggaggataaagtg
ctcgtcttcagtcagtctttaatcacgttgaacctaattgaggctttccttgcggcttct
caccgtgccagagacccatcaaaattagcgggcagctggattaagaatgtagattattat
cggctggacggctccaccaccgctccgttgaggaagagatgggcagagaagttcaacaac
actgccaacgttcgtggcaggttgtttctcatctcaacaagagccgggtcgctcggcatc
aacctcgttgccgccaacagggtcatcatctttgacgcgtcttggaatccatcgtatgac
atacagagcatttacagagtgtatcgcttcggtcagctcaaacaggtgtttgtgtaccgc
ttcttggcgcagggcacgatggaggagaagatctatgaccgacaggtgaccaaacagtcc
ctgtcctcccgcgtggtagatcagcagcagattgagagacacttcactctgaatgagctg
actgaactctacacatttgaaccagatctgctcgatgacccgaactccaagaagagcagg
cggcccacacctattttaccgaaggacagtatcctggcacagctgttgcaaacctgtaaa
gatcagatcatatcctaccacgagcacgagtctctgctggaccataaagaagaggaggag
ctcagcgaggcggagcgcagagctgcgtgggctgagtttgaagccgagtcaaacacagcc
agcctcccagtcagctcccccaaagactctttggataaacacactaatgaaaagctgctg
caaatgttgaacaaatgcagagcacaagtttcgcttgcgttctcgactctgcagaagatg
aggtcttacactattgaggagtacaagcaacgactgcaacaacagtatcctctyctgccg
gagctggagctgcagatgaaggctgggtactggaaacagtgtgacgataagaggcgagac
gttacccaagcctattaccaagaggctctgacgcagcaacaatcactcacactcagaatt
caggccctcctcaacaagcgaaggaaacttgtgattcccacaaatgtcaggactacaacc
cagcctggacagacgggataa
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integrated database retrieval system
