Austrofundulus limnaeus (annual killifish): 106516427
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Entry
106516427 CDS
T06063
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106516427
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106516427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
106516427
NCBI-ProteinID:
XP_013862240
UniProt:
A0A2I4B3A6
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MEKRPCREENIDSRETRHAADESEDGSSSESELEEQQPTRAQVSSNGCKRREPLAITKPH
RQLCRSPCLDRPSFSQSSTVQDFRDDDASAAPGLKLAIGREYQSKMEFALKLGYSGEQVE
AVLNKLGAAALINDVLAELVRLGNKVEPELQPCSSTFTSVSHPSCVKEAASPEVSVEDDS
VDIYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQSR
PDALITDQEILRKLEKQKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRD
LQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEYKKQPCPY
GKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALVKCGTGPAAVKGDG
SSEAKRVAPKRQSDPSIRSVACEPPEALSVVRKSETNSVPSLVSALSVPTMQPAKSHAAG
ALNTRSASSPVPGSLQFAHNSLEHMSSVQYPPILVTNSHGASVTYGEQFLKYDSVSDHGY
YSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRNPSHCAESCLSHSNSDSFSSYGDMYPSS
VDSSLEESIKGQQQAPAQSRMQAFSRGFRHEALSRVQSYGPEEPKQCPHKQSEAHLAPHI
QHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYDSNPMRQRRPPLC
REQHASWDPLPCGNESXGYHSYPLSNSLMPCCERVMVRSMPDKMEQIWNSPWETPSAVEH
QERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPQLTDPQQLAAVIVTKLRSGH
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgcccatgcagggaggagaacattgactcgagagagacccggcatgctgcc
gacgagtctgaggacggaagcagctcagagagcgagttggaggagcagcagcccacgagg
gctcaggtgagcagcaacggctgtaagaggagggagcccttggccatcaccaaaccccac
cgtcagctctgtcgctcaccatgcctcgaccggcccagtttttctcagagcagcaccgtg
caggattttcgcgacgatgacgccagcgcagcaccagggcttaaacttgccattggaaga
gagtatcagtcaaagatggagtttgctctgaagttgggctattcaggagaacaggtggag
gcggtgctcaacaagttgggtgctgcggcgctgattaacgacgttcttgctgagttggtg
cggcttggaaacaaagtggagcctgaacttcaaccgtgcagcagcacgttcacgtcagta
tcacatccttcctgtgttaaagaagctgctagtcctgaagtttcagtggaagatgactct
gtggatatctatgacaacctcaggcccatcgtcattgatggttcaaatgtggctatgagt
cacgggaacaaagaggtattctcctgccgtggtatccagcttgctgtcgattggtttttg
gaaaaagggcataaagacatcactgtgtttgtcccagcctggagaaaggagcaatctaga
cctgacgccctcatcacagatcaggaaattttgcgcaagctagagaaacagaagatcctg
gttttcaccccgtctcgaagagttcagggccgaagagtggtgtgctatgacgatcgcttc
atagtgaagctggcgtttgattctgatggaattattgtgtcgaatgacaactacagggac
ttgcaaaacgagaagccagagtggaagaagtttattgaagagcgcctcctgatgtattca
tttgttaacgacaagttcatgccgcctgatgacccactgggaagacacgggccaagctta
gaaaattttctccgcaagagaccagttgttccagaatacaagaaacagccttgcccctat
gggaaaaagtgcacatacggacataagtgcaaatactatcatcccgagcgtgtcaaccaa
ccgctgcgctctgtggctgatgaactgcgagcctttgccaaactgtctgcagtaaaaaca
atgagcgagggggctttagttaaatgtggcacaggtccagcagctgtaaagggtgatggc
agctctgaagccaaacgcgtggcacccaaacgtcagtctgaccccagcattcgctcagtg
gcctgtgaacctccagaggcgctctctgttgttcggaagtctgagacaaattcagtgcct
tccctcgtgtctgctctcagcgtrcccaccatgcagcctgccaagagccacgcagctgga
gccttgaacacacgatctgccagcagcccagttccaggttctctgcagtttgctcacaac
tccctagagcacatgtccagtgttcagtacccccccattttagtcaccaacagccacggc
gcctctgtcacatacggcgaacagttcctgaagtatgactcggttagcgatcatggatac
tattcactccacagtgatttttcaaatatgagcatgagcagcatgcataatgtggacagt
ttctgtagcatggagcacgagcatgtgtatcagagaaatcccagccactgcgccgaatcc
tgcctcagccactccaacagtgactcgttctcctcttacggggacatgtacccaagctcc
gtggacagcagcttggaggagagcatcaaaggacagcagcaagctcctgcacagagtcgg
atgcaggccttctcccgtggatttcgtcatgaagckctgtccagagtgcagagctacgga
ccggaggagcccaaacaatgtccccacaagcagtccgaagctcacctggcgccacatatc
cagcatgcagctgtgggagcccggtccagctgtcctggagactacccgctcactcaaaat
gtcctcccgcctttgtcctcccagccaacgcggtctctaggcatgactcgcatggacagc
atatcagattcaaggctatacgacagcaacccaatgagacagaggcgaccgccgctgtgc
cgcgagcagcatgcgagctgggaccccctgccctgtgggaacgagtccttwggatatcac
tcatatccgctcagtaacagcttgatgccatgttgcgagcgagtgatggtccgcagcatg
ccagacaaaatggaacaaatctggaactcgccgtgggagaccccatctgcagtcgaacac
caagagcggtacgttattccagatcaccagtatcagacatacaggaacctttgtaatatc
tttcctgcttacatagtccactcagtcatggagaagaaccctcaattgacagatccacaa
cagctggctgctgtcattgttacaaaactgaggtcaggacactga
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