Austrofundulus limnaeus (annual killifish): 106516529
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Entry
106516529 CDS
T06063
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04020
Calcium signaling pathway
alim04080
Neuroactive ligand-receptor interaction
alim04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106516529 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106516529 (grin2a)
04082 Neuroactive ligand signaling
106516529 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106516529 (grin2a)
Ion channels [BR:
alim04040
]
Ligand-gated channels
Glutamate (ionotropic)
106516529 (grin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
106516529
NCBI-ProteinID:
XP_013862387
UniProt:
A0A2I4B3S4
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MQGFCSPPPAGASPVCCCCCCFPCVRCASSPPGTGTTASRATPIPTEGMKWISIMSLSSK
RSKRRIRRRSTWSSVGDGVLLSLVLVAVTTMASPAAAQKQRSGGGSEKVPVLNIAVILGR
TRYISDRDIRALWSKEDPIDVNMVTLLVNETDPKSIITHMCDLMSGTKIHGVVFGDGTDQ
EAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASIQQEALLMLNIMEEYD
WHVFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVEEDSRSQIMLKKVQSPV
VLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNTEITPEAFPSGMISVSYDDWDY
PLEARVRDGLGIITLAAAAMLDEFGDIPEAKTSCYGQMEKTSKLPPSALHKYMMNVTFDG
KDLSFTEDGYQENPKLVVIVLNKEREWEKMGRLDNGSLSVKYPVWPRFNSFGDAELDDNH
LSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKCCKGFCIDILK
KIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFS
VPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFN
RNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASY
TANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIKKNYPAMHQYM
VKYHQTGVVDALVSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAL
QKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLA
TAMGLSLITFVSEHLFYWRLRYCFTGVCSGRPGLLFTISRGIWSCIHGVHIDMKKKTDLD
FSPQDKMLKLIKSAKQMTNMSNLGGSGLNSPKREFMHSAGPMIMDMMAEKGNFIYTDNRS
YAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANPNTVEVSVSPDTVQTN
AKPPRSLWKKSGDTLRSVPPGPAPMPDMLMPDPRISMKTQRYLPEDTAHSDISDCSSRAA
SYKDPENNKHLKPKDNLKKRSVTSKYPRDCSEVELSYLKTKQVSGGTNQSGRGGGVGEKI
YTIDSDRELSLHSDPIHFRESHGLAADDVDYPEIYSDHSDNYRKCEQPIIHLNSSPMHHT
DSDLLSDSAYSKHYNLKEKNISLSPHETIDRYKQTHCRSCLSKVTASYPPAGPYGSAGSA
SASGTRSPYNRCEACLHTANLYDISEDQLLADPLGSPNMHHQEQQPDEMFGLYWPQTDGP
HVQKRNRLRLSRQHSFDNIMLEKPKDLDLGRPARSVSLKEKDRFLDSASDSHYANLFGMR
PYSGKLFGTGSKSMLFNHNLEESKRSKSLYPAHGSENPFLSHSLRDDTSSRLVHGRSSSD
IYKQLAVGSPAVALGAAPIKTRNDANNLRSSGKSSSSYCSRDGRIANDMYNKEHVMPYSA
NKTSAYPASRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtttctgcagcccgccgccggccggagcgtcccccgtctgctgctgctgctgc
tgctttccatgcgtgcgatgcgcgtcctctcctcccgggacaggaaccacggcatccagg
gcaactccgatcccaaccgaggggatgaagtggatcagcattatgtccctcagcagcaaa
aggagcaagaggaggattagaaggaggagtacttggagcagtgtaggggatggcgtgcta
ctctccttggtcctggtggcggtgaccaccatggccagccctgcagcggcgcaaaagcag
agaagcggcggcggttcggaaaaagtgccggtcttgaacatcgcagtgatcctgggacgc
acgcgctacatctctgaccgagacatccgagctctttggagcaaagaagaccccatcgac
gtcaacatggtcacactgctggtcaacgagactgacccaaaaagcatcatcacccacatg
tgcgacctgatgtcgggaaccaagatccacggcgtggtgttcggggatggcactgaccag
gaggccattgcccaaattttggattttatttcctcgcagacgctcatacccatcttgggc
attcatggagggtcgtccatgatcatggctgacaaggatgtgaagtcaactttcttccag
tttggtgcttccatccagcaggaggctctgctgatgctaaacatcatggaggagtacgat
tggcatgtcttctcaatcgtcacatccaagttccccggataccaggagtttatcaacatc
ctaaaaactacagttgacaacagttttgtgggctgggacctccaaaatatcatcactctg
gatgctgtggaggaggacagtcgctcycagattatgctcaagaaggtccagtctccagtg
gtattgctctactgctccaaagacgaagcggtctacatcctggaggaggctcgctctctg
ggcctgactggatttggatacatctggattgtgccatcgctgacgacagggaacacggaa
attacaccagaggcgtttccatcaggaatgatttcagtgtcytatgacgactgggactac
ccgttggaggcacgagtccgtgatggactggggatcataactttagcagcagcagccatg
ttggatgagtttggggatattcctgaagccaagacatcctgctatggacaaatggaaaaa
acaagcaaacttccaccaagtgctctgcacaagtacatgatgaacgtgacgtttgatggc
aaagacttgtctttcacggaagatggctaccaggaaaacccgaagctggttgttattgtt
ctcaacaaagaaagagagtgggaaaagatggggagactggataacggcagcctctctgtg
aagtatccagtatggccacgtttcaactcctttggtgatgctgagcttgatgacaaccac
ctgtccatcgtcaccttagaagagaaaccgtttgtcattgtggaagatgttgagcggctc
actggtacctgcatgaggaactctgtgccttgcaggaagcatatcaaagacaacacaact
gaagccggagggacatatatcaagaagtgctgcaaaggtttttgcattgatattctgaag
aaaatcgccaagtatgtcaagttcacctacgacctgtacctggttactaacggcaaacac
ggcaagaagatcaacaatgtctggaatgggatggtgggagaggtggtttataagaaagcc
gtcatggcggtgggatccctgaccatcaacgaggagcgttcggaggtcatcgatttctct
gtcccatttgttgagactgggatcagtgtcatggtctcacgcagcaatgggaccgtctct
ccatcagctttcctcgaaccgttcagcgcatcagtgtgggtgatgatgtttgtgatgctc
cttctggtgactgcaatggccgttttcatgtttgagtacatcagtcctctcggctttaac
agaaacctggcacagggaaaagatccccatggcccttctttcaccatgggcaaggctgtg
tggctactttggggtctggtcttcaacaactctgtccctgtgcaaaacccaaaaggaacc
acgagcaagttcatcgtgtcggtgtgggccttcttcgctgtcatcttcctggcctcctac
actgccaacctggctgccttcatgattcaggaggagtttgtcgaccaggttactggrctt
tcagacaacaagtttcagaacccgtatgcgtactcccctccattccgctttggaacagtc
ccaaatggttccactgagaggaacatcaagaagaactaccctgccatgcaccagtacatg
gtgaagtatcatcaaactggagtcgtggatgcacttgtcagccttaaatcgggcaagctg
gatgcattcatctatgatgcagcagtgttaaactacatggctggcagagatgagggatgt
aagctggtgaccattggcagcggatacatctttgcaacyactggctacggcattgctctg
cagaaaggttcctattggaagcggcaggtggatcttgcaatcctggcaattatcggagac
ggtgaaatggaagaactagaagctcagtggctgacagggatttgccacaatgagaaaaat
gaagttatgtcaagtcagctggatgtggacaacatggcgggggtcttctacatgctggcc
acagccatggggctctcccttatcacatttgtgtcagagcatctcttctactggaggctc
agatattgtttcactggagtctgctctggcaggcctggacttcttttcaccatcagcagg
ggaatttggagctgcatccacggagtccacattgacatgaagaaaaagactgatcttgac
ttcagccctcaggacaaaatgcttaagctcattaagtctgccaagcagatgacaaacatg
tctaacctgggtggctctggcttgaactcacctaaacgagaatttatgcactctgctggc
cccatgatcatggacatgatggcagagaagggcaacttcatctacactgacaacagaagc
tatgctcccaaagatatgatatatggggacactggtgaccttcagtcttatcttgccaac
cgccacaaagatcaccttaacaactacatttttcagggggggcagcatcctttgacctta
aatgatgccaatccaaatacagtggaggtatctgtgagtcctgacacagtccagaccaac
gccaaaccacctcggtcactgtggaagaaatcaggggacacgcttcgctctgtgccacct
ggtcctgctccaatgcctgacatgctgatgccagacccacgaatatcaatgaagacgcag
cgctaccttcctgaggacacagcccactctgacatctctgactgttcaagcagagcagcc
tcctacaaggacccagaaaacaacaagcacctgaaacccaaggacaacttaaaaaaaaga
tctgtgacgtcaaaatacccaagggattgcagtgaagtagagctgtcctacttgaaaact
aagcaggtcagtggtggaactaaccaaagtgggagaggaggaggagtaggggagaaaatc
tacactattgactcagatagagagctaagccttcattcagaccccattcacttccgtgaa
agtcacggccttgctgcagacgatgttgattaccctgaaatttactccgaccacagcgat
aactacaggaaatgtgagcaacccatcattcacttgaattcttcgcctatgcatcacacg
gactcagatcttctctctgattcagcttactctaaacactacaacttgaaagagaaaaat
atctccctgtcccctcatgaaactattgatcgctacaaacagacacactgccgctcctgc
ttgtccaaagtgactgctagctacccaccagcaggaccatatggctcagctggatctgcc
tcggcatctggcacccgttccccatataatcgttgtgaggcatgcctccacacagccaac
ctgtatgacattagtgaggaccagcttcttgctgaccccttgggcagtcccaacatgcat
caccaagagcagcagccagatgaaatgtttggtctttattggcctcagacagatgggcca
catgttcaaaagagaaaccgcttgaggctaagtcgtcagcactcttttgacaacatcatg
ctagaaaagcccaaggaccttgacctgggccgaccagcacgtagtgtcagtctcaaagag
aaggatcgcttcttggactcagcatctgactcgcactatgcgaacctttttggcatgcgt
ccttactctggcaaactttttggcacggggtctaaatcaatgctgtttaaccataacctg
gaggaaagcaaaaggagcaagtccctgtatccagcccatggctcagaaaacccttttctt
agccactcgttgagggatgataccagcagcagactggtccatgggcgcagctcctctgac
atttacaaacagttggcagtaggttctcctgcrgtggccctaggagcagctcccatcaaa
acgcgtaacgatgcgaacaatctccgctcttccggtaaatccagctcttcatactgttca
agggatgggcggatagctaatgacatgtacaataaagagcatgtgatgccttactcagcc
aataagactagtgcatacccagcctcacggggtgtcctaaactcagcccagtttagcaat
agacgggtgtataagaaaattcccagtctggagtcagatgtttaa
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