Austrofundulus limnaeus (annual killifish): 106516580
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Entry
106516580 CDS
T06063
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alim04990
]
106516580
Domain-containing proteins not elsewhere classified [BR:
alim04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106516580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
LRR_5
Ig_2
LRRNT
LRR_14
Motif
Other DBs
NCBI-GeneID:
106516580
NCBI-ProteinID:
XP_013862463
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MIRHFAAAFCLALVFLSHLSTPCPSQCSCFFHKLSDGSKARSVLCNDPEITAVPPNFPTD
TSKLRIEKTAITRIXSNNFHYLNSLEFLWMSFNSLNSLNADSFRGLSNLDELRLDGNSLT
SFPWEALLDMPVLRLLDLHNNKISTIPASATMYIKNITYLDLSSNSLTTVPAEVLTMWLS
VKPSQDSDSSKLILGLHDNPWLCDCRLYDLVQFQKSPSSSVALIDTRLRCADPESLSGVS
FTEAELQKCQVPRVHTAVARVRSSLGNNVLLRCGTIGVPIPELSWSRADGKKMNGTVQDE
ISKEGIIWSILSVPAVSYRDSGKYVCKATNFVGTADAIISLVITDSIRSEEAVGGASKRG
RGKKPGGIGRAAYQEKLIARYVPPPTSTMAQPIIEPLNGKSVTGKYEIESYSVSDGASKG
QYKGPSPRKSVEVGQNALGNLAANASSLQQVPEKRVVRSVKVIGDTDNTVSLNWRAPTAT
NTTEFSVLYAVFGERDMRRINVGAGKNRITIEGLVPKTKYIACICVKGLIPKKEQCVIFS
TDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKXCQKMLGRQTKEMQDSYVTF
ETLGPGGKAKGMEGEYLTRLNPDESNRLLSARSSVDSEAIARTEGPPNEYFC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgatccgacactttgctgctgctttttgtttggctttagtttttctttctcatctaagt
actccgtgtccrtctcagtgcagctgcttctttcataaactaagtgatggatctaaggca
aggagtgtgctttgtaatgatccagaaattactgcggtacctccaaatttccccactgac
acatcaaagctgcgcattgagaagacagcgattacacggattkcaagcaacaacttccac
tacctcaacagtctggagtttttatggatgtctttcaattccctcaactcactgaatgcc
gacagcttccggggtctctccaacctggatgagctcaggctggatgggaactccctcacc
tccttcccctgggaagctctgcttgacatgcctgtcctgaggctccttgacctgcacaac
aacaagatctccaccatcccagcctctgccaccatgtacatcaagaacatcacctatttg
gatttatccagcaacagcctcacaacagtccctgctgaagttctcacgatgtggctgagt
gtgaagccttcccaagactcggattcctccaagctaattctgggtcttcatgacaaccca
tggctgtgtgactgccgactctatgatctggtccagtttcagaagtctccctcgtcgtct
gtggctctcatcgacaccaggttgaggtgtgccgatccggagagcctatcaggagtttcc
ttcaccgaggcagagctgcagaaatgccaggtgccgcgggtgcacacggctgtggctcgt
gttcggagctcattgggcaacaacgttttgctacgctgtggcaccattggagtgcccatt
ccggagctgtcctggagtcgcgctgatggcaagaaaatgaacggcacagttcaagacgag
atttctaaggaaggcatcatctggtccattttgagtgtgcctgcagtgtcctacagagat
tctgggaaatatgtgtgcaaggcaaccaactttgtgggcactgcagatgccatcatctcc
ttggtgatcactgattccattcggtcagaggaagcagttggtggtgcttctaaaagaggc
agagggaagaagcccggtggcattggaagagcagcataccaggaaaaactcatcgctaga
tatgttccaccaccaacaagcacgatggcccagcccattatcgagcctcttaatggcaaa
agtgtgaccgggaagtatgagattgagagctacagtgtctctgatggtgcttctaaggga
caatacaaaggaccaagcccccggaagtcagtggaggtgggtcaaaatgctttgggaaac
ctagctgccaatgcttcatccttacagcaagttccagagaagcgggtggtgcgttcagtg
aaggtcattggggacactgacaacacggtctctttaaactggcgcgcccctacagccaca
aacaccacagaattcagcgtcttatacgctgtgtttggtgagagagacatgcgccgcatt
aacgtcggcgccggaaagaaccgaatcaccatcgaaggccttgtgccaaagacaaagtac
attgcctgtatttgcgtcaaaggcttgattccaaaaaaggaacagtgtgtaatcttctca
accgatgaggccgccagtgccagcggcactcagaagctcattaatgtggtggtgatcacc
gtggcgtgcgtgatcgctgtccccctgacactgatcgtgtgctgcggggcgctcaagaaa
crctgccaaaagatgttggggcggcaaacaaaagaaatgcaggactcctacgtaacgttt
gaaactcttggtcctggaggcaaagctaaaggaatggagggygagtatctgaccaggctc
aatcctgatgaatcgaacaggctgctgtcggcgaggtccagcgttgactcagaggccata
gcgaggactgaagggccgcccaacgagtacttctgctga
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