Austrofundulus limnaeus (annual killifish): 106516696
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Entry
106516696 CDS
T06063
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106516696 (gapvd1)
Membrane trafficking [BR:
alim04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106516696 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
106516696
NCBI-ProteinID:
XP_013862635
UniProt:
A0A2I4B4H4
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFIDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVIHNVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERLTPAQQERFGEKGSE
DYKRKVQAAVETNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
MRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKGCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLALVDFVR
SVTAGDHLREEEHMALETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDSTATTLSAHIPLVTPFAARSRSRTNIAQEGEAEASSQESLQELMPEEVLV
ISLGTGPQTVPGMMSENEVLNLHMGDGASGDGPADDAKLHGKPDKTLRFSLCSDNLEGIS
EGPSNRSNSVSSLDLDRESVSELGAEPSENNGAEALQLLEHEHATTQDNLDDKLRKFEIR
DMMGLTDDRDISETVSETWSTDVLGSDFDPNMDDDRLQEIAGAAAESMLGSLLCLPGSGS
VLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREVS
SRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESSHGAHNLTSP
PSQAESLLAMFDPLSSGEGSSTGTIVRPKVHYPRPNHPPPDPPIPEASALGPETRHSLFA
PHSLVQGELEHTKQRHSFPDRLVRSRSSEIVCPGRRPTSDPGLNRRVAVEERDPAGAFAL
GPSSSPSKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKAPITAFKKRDKQEKNDA
AQERVPQDEPLLRQNNQAQAAEDILDKYRNIKRPGPSDVASAGASYDGPGDLCVEDNVND
APREDTLHNISADDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADSVALPIMAPATTR
NGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQIAQIQETTRCVSRFDARTCRKLLAAIA
EDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMESK
MLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQMAIERSVMNR
IFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHKALQIPEVYLKEAPWPSAQSEIRTI
NAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLSTVQY
INNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcgcaccacctaaagcaggaacgtctgtatgtg
gcatcagagaagcagctgattcagaggctcaacagtgatgtgttgaagacagccgagagg
ctgtaccgggctgcctggatcgccaagcagcaaaggatcaacctcgatcgtctcattctg
accagtgcggaggcctccccggctgagtgctgccaacatgccaaaatgctggaagacacg
cagtttatagatggctacaagactctgggtttccaggaaacaatctatggagagtttttg
gccaggttgagggaaaatcccagactggttgcatcctgccttgtggcaggagagagacta
aaccaggagcacacccagggtgtcatacataatgtcttcacctcactttacggcaattgc
attatgcaggaggatgagagctacctactgcaggtgttgagataccttgtagagtttgag
ctgaaggagagcgacaaccctcgccgccttctccgacgagggacctgtgccttcagcatt
cttttcaagctcttttctgagggcctgtactcagccaagctcttcctcactgcaaccctt
catgaacccattatgcagctgctggtggaggatgaggaccacctggagacagacccgtcc
aaggtgactgagcggctcaccccggcgcagcaggaacgctttggagagaaaggttctgag
gactacaagagaaaagtgcaggcagctgttgagaccaatgaagccaagctggtcgctctt
gtaaacaagtttattggctacttgaagcaaaacacctattgctttcctcacagcctgcgc
tggattgtgtcccagatgtacaagactttatcatgtgtagaacgtcttgaggtgggagag
atgcgcaccatgtgcacagacctgctgctgacctgcttcatttgccccgccatagtcaac
cccgagcagtatggtattatctcagacgcacccatcaacgaggtggctcgctttaattta
atgcaggtggggcagcttttgcagcagctggctatggctgatgacgatgcagacccaagg
cgaaaaagcagtttgtctaaatttgataagggttgtgttgctgcctttctggatgtggtg
attggaggaagagctgttgagaccccacccatgtcctccatgaaccttcttgaaggcctc
agtaggacagcagtctatattacccataaccagctgcttgcactggtggactttgttcgg
agtgtgacggcaggggaccaccttcgagaggaggagcacatggccctggagaccctgcta
gccaatgtgccacagtctcgaaccgtgaagagcaacagcctggagctcactccctccaac
accccccagctttccccagctaccactcctgccaacaagaagaacagacttcccatagga
caacatttagctgctataacatcctgggactccacagccaccactttgtccgctcacatt
ccattagtaaccccttttgctgctcggagccgcagccgtaccaacatagcccaggagggg
gaggcagaggccagctcccaggagtccctacaggagctgatgccagaggaggtgctcgta
atttcactaggaactggccctcagactgtccctgggatgatgtcagagaatgaggttttg
aacttgcacatgggcgatggggcctcaggggatggccctgcggatgatgctaagctgcat
gggaaaccagataaaacgttgcgcttctcgctgtgcagtgacaacttggaaggaatctca
gagggaccatccaatcgttctaactctgtgtcctcgctggacctggatcgggagtctgtt
tctgagctgggagctgaaccatctgagaacaacggggcagaggctctgcagcttctggag
catgaacatgccaccacacaggacaacctggatgacaaactgcgcaagtttgagatcagg
gatatgatgggtctgacagatgaccgtgacatctctgagacggtcagtgaaacctggagc
actgatgtgcttggcagtgactttgacccaaatatggatgatgatcgactgcaggaaata
gcaggggcagctgcagaaagcatgctcggcagcctgctgtgccttcctggctccggttca
gttctgctggacccctacggctccaccatctcagagaccacgagcgaagcctggagtgtg
gaggtccttcccagtgactcagaagccccagatctgaagcaggaggagcgtcttcaggag
ctggagagctgttctggggtcggcagtacgtccgatgacacggaggtcagagaggtcagc
tccagacccagcacacccggcctcagcgttgtctcaggtatcagtgcaacgtcagaagac
attcctaataagatcgaggacctgcggtcggagtgcagttcagattttggtgggaaggac
tctgtgaccagtccagatggggaagagtcgagccacggagcccacaatctgacttctcca
ccttcacaggctgaatccttactagccatgtttgatcctctctcctctggtgaaggttcc
tccactgggacaatagttagacccaaagtgcactatcccaggcccaaccaccctcccccc
gatccacccatccctgaagccagcgccctgggacctgagacacgccactctcttttcgcg
ccacacagtttggtccagggggagctggagcacacaaagcagcgccactccttccctgac
aggctggtgcgcagtcgcagctctgaaattgtgtgccctgggcgccggcccacaagtgac
cccggccttaacagacgggtggcagttgaagagcgtgaccctgctggggccttcgcttta
ggaccttcctcatcacccagcaaagactccctgaaaggagaggtggaggacaggaaagac
agtgatgatgagaagtctgatcgcaacagaccgtggtggaagaaacgttttgtgtcagcc
attcctaaagctccgatcacggcttttaaaaaaagagacaaacaagagaaaaacgatgca
gcccaggaacgtgtcccacaagatgagccattgctccgacagaacaatcaagcccaggca
gctgaggacatcctggacaagtacaggaacatcaagaggcccggtccaagtgacgtagcc
tcagcaggggcctcttatgatggaccaggagatctttgtgttgaggacaatgtgaacgac
gccccgagagaagacactctgcacaacatttctgctgacgacctcccagactcagccagc
cagacggcacagcaacatgattccaagttttctttcagtgatgcaaagaagaagctgagg
ttggctttgtgttctgcagactctgtggctctccccatcatggcaccagccaccacacgt
aatgggctgcctgatcacatggatcctgaagacaatgagattgtctgtttcctaaaggtc
cagctagcagaagccatcaaccttcaagataagaaccaaatcgctcagatccaagagacc
acgcgctgcgtcagccgcttcgatgcgcgcacctgcaggaagctgctggctgccattgca
gaggattacagaaagcgggccccttacatagcctatctaactcggtgtcgtcagggcctg
cagacctctcaggcccatttggagaggcttttacagagggtgctgagagacaaggaggtg
gccaatcgctacttcaccacagtctgtgttcgactcctccttgaacatatggagtcaaag
atgcttgacttcattaaagcgttccaaggatgcacagcagctgatgacaagacagcagca
gtggaggattttctgcgctatttgtacggtgccatggcccgtgatgccatttggcagtat
gcaagtgaagaccagctgcaggatgcccagatggctatcgaacgcagcgttatgaaccgc
atcttcaaactggctttctaccccaatcaagatggagatattctcagagaccagcttttc
catgaacacatccagagactctcaaaagttgtaacagcaaatcacaaagctcttcaaata
ccagaggtctacctaaaagaagctccctggccctctgcacagtctgagatccggaccatc
aatgcatataagaccccccgagacaaagtccagtgtattctgcgtatgtgctccaccatc
atgaatcttctcagtttagccaacgaggactctgtgccaggggcagatgactttgtcccc
gttctcgtctttgtcctcataagggcaaacccgccctgcctgctgtccaccgttcagtac
atcaataatttctacgccagccggctgagtggggaggagtgctattggtggatgcagttc
accgcggcggtggaattcattaagaccatcgacgatcgcaagtga
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