KEGG   Austrofundulus limnaeus (annual killifish): 106516704
Entry
106516704         CDS       T06063                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106516704 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:alim03041]
    106516704 (sf3a1)
Spliceosome [BR:alim03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106516704 (sf3a1)
 Complex B
    106516704 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    106516704 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 106516704
NCBI-ProteinID: XP_013862647
UniProt: A0A2I4B4I7
LinkDB
Position
Unknown
AA seq 809 aa
MMHLHLLTTARVGSCLFSLKDTAMPPGPVQIVQPEPVKQNDAPPEETPATKPIVGIIYPP
PEVRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKA
QEPSAAVPKVMQQQALQQSQQLPQKVQSQVIQETVIPKEPPPEFEFIADPPSISAFDLDV
VKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLL
IKLKKEAENPKEVMDQVRYRVEWAKYQERERKKEEEERERERVAYAQIDWHDFVVVETVD
FQPNEQGHFPPPTTPEELGARILIQERYEKFGESEEVEMEVESEDEEDERPDRAEGQPSQ
PDQDTQVQDMDEGSDDEEESVKAPLPPENPMPPPLPPTPDQVIIRKDYDPKASKPLPSVT
TTDEYLVSPITGEKIPASKMQEHMRIGLLDPRWLEQRDRSIRERQTEDEVYAPGLDIESS
LKQLAERRTDIFGVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQ
IEAIHKAKGLVGEDDTKEKIGPSKPSEIHQPPPIPSVPPSMPKPSPPVAAVPRLPVSVAP
PVRTTLLSAVPVLPRPPVTPVVRLAPGQVITQMPPMIPAPRVNVVPMPPTAPHIMAPRPP
PMVVPTAFVPAPPMPQPPHSAPAPPVHPPPPREDEPVNKKMKTEDNLIPEEEFLRRNKGP
VAVKVQVPNMQDKTEWKLNGQVLNFTVPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFI
KDSNSLAYYNMMNGSIIHLALKERGGRKK
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgatgcacctccatttgttaacgacagcgcgagttggtagttgtctgttttcattgaaa
gacaccgccatgccgcctgggcctgttcagatagttcagccggagcccgtcaagcagaat
gatgcacctccagaagaaacccctgctacaaaacccattgttgggatcatatacccacct
cctgaggtccgaaatatagttgacaagacggccagctttgttgccaggaatgggcctgag
tttgaagcaagaatccgtcagaatgagatcaacaacccaaaatttaatttcctcaacccc
aatgatccctatcatgcgtattatcgtcacaaggtcaatgaattcaaagagggtaaagcg
caagaaccatcagcagctgtgcctaaggtcatgcaacagcaagctctgcagcagtcgcaa
cagcttcctcaaaaggtccagtcacaggtgattcaggagaccgtgattcccaaagagcca
ccccctgagtttgagttcattgcagatcctccatcaatctcagcatttgatctggatgtt
gtcaagctcacggcacagtttgttgctcgcaatggacgccagtttctcactcagcttatg
cagaaggaacagaggaactaccaatttgactttttgcggccacaacacagcctcttcaat
tacttcaccaaactggttgagcagtatacaaagatactgatccctcctaaaggcctactc
atcaaactcaagaaagaggctgagaacccaaaagaggtcatggaccaggtgagataccgt
gttgagtgggcaaagtatcaggagcgagagaggaagaaggaagaggaggaaagggagaga
gaacgtgtagcatatgcacaaatcgactggcatgactttgtagtggtcgagacagtggac
ttccagcccaatgaacaaggccacttccctccacctactaccccagaggagctgggcgct
cgcatcttgatccaggagcgttacgagaagtttggagaaagcgaggaggtggaaatggag
gttgagagcgaggatgaagaagatgaacgtccagatcgggctgaaggtcaaccttctcaa
cctgatcaagatactcaagtgcaggacatggatgagggatctgatgatgaagaggaaagt
gtgaaagctccactgccaccagagaaccccatgccacctcccttgcctccaactccagac
caggttatcattcgcaaggattatgaccccaaagcttccaagcctctgccttcagttaca
actactgatgagtaccttgtttcaccaatcaccggtgagaagattccagccagcaagatg
caagaacacatgcgtattggtctgctggacccacgctggctggaacaaagagaccggagc
atcagagaaaggcagacagaagacgaggtctatgctccgggtttggatattgagagcagc
ttgaaacaacttgctgagaggcgtaccgatatctttggtgtggaggagacggccatcggt
aagaagattggggaagaggaaattcagaagccagaagagaaggttacctgggatggccac
tcaggaagcatggcgcgcacacagcaggcagcgcaggccaacatcactctgcaggagcag
atcgaagccattcacaaggccaaaggactggtgggagaggacgacactaaggagaaaata
ggcccgagcaaacccagtgaaattcatcagccacctcccattccttctgttccaccaagt
atgcctaaaccttctccaccagtcgcagctgtgccacgcctcccagtctctgtggcgcct
ccagtgcgtaccacactcctgtctgccgttcctgtgcttccaaggccccctgtgactccc
gtggtacgtcttgcaccaggccaggtaataactcagatgcctcccatgattcctgctccc
cgtgtcaacgtggtgcccatgccaccaacagcgccccacatcatggcccccagaccacct
cccatggttgttccgactgcctttgtccctgctcctccaatgccacaaccaccacactct
gctccagcgccacctgtccacccacccccacctcgcgaggacgagcccgtcaacaagaag
atgaagacagaagacaacctgattccagaggaggaattccttcgaagaaacaagggtcct
gtggcagtcaaagtacaagtaccgaacatgcaggacaagacagaatggaagctaaatgga
caggtgctgaatttcaccgtcccactttcagaccaggtttctgtcattaaagtcaaaatc
catgaggctacaggcatgccagctggaaaacagaagttacagtatgagggtattttcatc
aaagattcaaactccctggcttactataacatgatgaacggttcaatcatccacttggct
ctgaaggagagaggtggaagaaagaagtga

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