Austrofundulus limnaeus (annual killifish): 106516813
Help
Entry
106516813 CDS
T06063
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106516813 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106516813 (tpr)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106516813 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF7491
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
106516813
NCBI-ProteinID:
XP_013862807
UniProt:
A0A2I4B4Y8
LinkDB
All DBs
Position
Unknown
AA seq
1975 aa
AA seq
DB search
MAALLLQEFEASELSXIPEAIKNRLERILSVLHSEIDSLKAQHQQYLVDIEQQFFEKDGQ
LARTELLTQEHHKLREEYNRLSEELQSVREKNEESERAREKLSSEQTLLSRAKGELEAEK
RELVRTLDRRSLEIEHLNDDLRQLNDKLVEVSTSKMTLQMKLDELEAAELNIKYKEKRMD
QEKKLLHDQMSWLQDELKAKTEELLSLSREKGNEILELKCTLENKEDELKKLQDQVASLK
TSNEHHQKQNEDMINKLRDAKEQHAIMEEKFRKELNANIKLSNLYKEEAADSEAKSKELS
GAVDELQKLLKEAGHANKALEDKLQEMNAASDKAVSELKNRIQSLEKELDNANELLSSSK
RRGSVGASVLTEDQMTTMSPTAAAVSKIKPGMKLTELYTAYLESQEQLQLERLENKRVNK
YLDDIVQEVESKAPLLKRQRDEHERMQKSVASLSARLEQAMKDVHRLQNEADGAKKHASV
LERENQRFEFQVSDLAQQVRVLLIELEEARGNHVLHEEEMSSADVSSTSEVISQNLVTFR
SVEELQTQNQRLLVAFRELXDAQEKEEFETTDNWRVEQEQRWGNVQAELESLKEQRNQLL
KMTDSIVKQRDMYRVLLAQATGVTFPQQGTPPDEFSLTSTPRRSPAATPTAGTPTALVSM
AAESAEALEAKAALRQLQEVFSSYKSERSESEKAMAEQNEKLQEQLSDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRKEIASLRDKEQKMSAAKQTLEQTVHTLNEELKATKEKLSMTE
GDAENLRKERDMLKLVESTLNQEKEDILRQQQSQRLLQIDLQAIRSTLERSESETRQRLN
SQLEKKEQENSQLQKRLEQEVEQRHLFSRNQEMQLMDVKRQLETQVALNQKLKEQLNDAE
LELNTLKIQQGSNETRHTLSSPSASIRGLQGSDGDGERLQGRLQLAETRVEEQAERLKVI
TSNMEQYRAMAQSLEESLEREKQVTEQVRSATETRLKEAGEQQRRLEEKLLEAEKEKQNL
EEQKRSTVXSLEEQINDLKRNLSSAQAEHQVMLQQLAVAETQQQQALMDSQEQAKLAAEA
QDKYEQEMILHAADVEALQAVKAQAQQAVEFRHQLEEKVQRLSSELLEARVSWEEQEKIL
KEEMSKMESRHEELQRQNTLLHEQVQTLSNKLADNLQRASSESSLNISLTEEGKSEDQLL
EILRFVRREKEIAESRFEVAQGETLRHRLRVEHLERELKEVQDSLGAARERMQVTAKTLA
QHDELMNKTETMNILVETNKMLREEKEKMXQELQQSQAKVQQLESEVLPLQEANSELSER
SGIMTGEKLILEEEVKRWKARTQQLVSQQRDSDPDEFKRLHSEKEVHVKRIQQLCEENGR
LSRELTRTNANTISIQGQLQNVRDXMGKVTEERNALKRELETKTQELQEKMRTINQVKKI
GRRYKTQYEELKVEHDKLVAEAAAGPSQDEEARQASVHELQSVKDSLSQTETRNKELEGQ
LENINKVVTEREAEVRSAQEQSARLQTELTRLRQELQDKASQEDTLKQQMTEKEEKTRKV
LLNAKQKISHLTNSKDQMQKENEELKEKLKEAEMRMSALKSQYESRLSKRSQQERQDQRD
EAPEAGPSKIQEQQRGTEQRQISLKTTSAADRGSACTSEPPTANIKPTPVVATASKQTNI
PSNKPTPRASIRPMITPAPVPTPTPTATVMPTTQVETQEAAMQSSEGPPVEHVTVYGSAS
GSVRSASPNVQTTLASPILTVQQIQTQATAFVQPTQQQSVTHPEPANQEPPPVVIEAAPS
PQVDWPSTFPTTSVFGTVSATPGTSALTKRPREEEESSAVAIDTEAAQEDNSRAPIPKKL
RINQRVGQEEEMQAEDSAEPEGVVPTDSQDGAEVNQQTEEFSNLEEAEDAATSQSMSVEQ
LLTPAQSETPDPLQHEVIVILTDSESEEHEEERSFQTWRKPKTLQPPSQCQWSNY
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcytgttgcaggagttcgaggcttccgagctttcttygatacctgaagcg
attaaaaacagactagaaagaattctgtctgttcttcattctgaaatcgattcgttaaaa
gcgcagcatcaacagtatctggttgacatcgaacaacagttttttgaaaaagatggccag
cttgctcggacggagcttttgacccaagaacatcataaactcagagaggagtacaacaga
ctcagtgaggagcttcaaagtgtccgtgagaagaatgaagagagcgaaagggcgcgtgag
aagctgtcttcggagcagactttgctctcaagggccaaaggagaactggaggcagaaaag
cgagaacttgttcgaacattggatagaagatccctggaaatagagcatttaaacgatgac
ttgaggcagcttaatgataaattagtggaagtcagcacctctaagatgactctgcagatg
aagctggatgagcttgaagctgcagaactaaacataaaatataaagagaagcgaatggat
caagaaaagaagctgctacatgaccaaatgtcttggttacaagacgagttgaaggccaaa
acagaagagctgctgtctttgtcccgagagaagggtaatgaaatcctggagctaaaatgc
accctggagaataaagaagacgagttaaaaaaacttcaagatcaagtggcgagtttgaag
acttcaaatgaacaccatcaaaaacaaaatgaggacatgatcaacaaactaagagacgca
aaggagcaacatgccatcatggaggaaaagtttaggaaagagctaaatgccaacatcaag
ctttccaatttatacaaggaagaagcagcagattctgaggctaagagtaaggagctgagt
ggggcagtggatgaactacagaagttgctgaaagaagctggacatgctaacaaggctctg
gaagacaagctacaggaaatgaatgctgcatcagataaagctgttagtgaattaaaaaac
aggattcagagtcttgagaaagagctggacaacgccaatgaactgctctcaagttctaag
cgtagaggctctgttggtgcgtctgtgctgactgaggatcaaatgacaacaatgtctcca
acagcagcagctgtgtccaaaataaaacctggcatgaagctaactgagttgtacacagcg
tatctggagagccaggagcagctgcagctggagcgactggagaataaacgagtcaacaag
tatttagacgacatcgtgcaggaagtagaatctaaagccccgctcctcaaacgacaaagg
gatgaacatgaacgcatgcagaagtctgtggccagtctgtctgccagattggagcaagct
atgaaggatgtgcaccgtctacagaatgaggctgatggtgccaaaaagcatgcttctgtc
ctggaaagggaaaaccagaggtttgaattccaggtgtctgatttggctcaacaggttcga
gtactgcttatcgagctggaagaggctcgtggaaaccacgtgcttcatgaggaagagatg
agctccgctgatgtcagcagtacttcagaggtgatcagccaaaacttggtaaccttccgy
agcgtggaagagcttcagacgcagaaccagcgtcttctggtggctttcagggagctcwgt
gacgcccaagagaaagaggagtttgagaccactgacaactggcgtgtggagcaggagcag
aggtgggggaatgttcaggcggagttggagtctctgaaggagcaacgcaaccagctgcta
aagatgackgattctattgtgaagcagagggacatgtaccgcgtgctgttggctcaggcc
acaggagtcaccttccctcaacaaggaacaccacctgatgagttctccctgacatctact
cccagacgttcacctgcagccactcccaccgcagggacaccgactgcacttgtttccatg
gctgcagagtctgctgaagcactggaggccaaagcagctttgagacagttgcaggaagtg
ttctcctcctataagagcgagcgttcagagagtgaaaaggcaatggccgagcaaaacgag
aagctccaggagcagctgtccgatcttcgctctcagaatgccaagatatccacccagcta
gaatttgcttcaaagaggtacgagatgcttcaggacaacgtggagggctacaggaaggag
atcgcctcacttagagataaagaacagaagatgtctgctgccaagcagacactggagcag
actgttcacactctgaatgaggagcttaaagctaccaaggagaagctcagcatgactgag
ggcgatgctgagaaccttcgcaaggagagagacatgctgaagctggtagaatctacactg
aaccaggagaaggaggacatcctgcgtcaacagcagagccagaggctgctgcagatcgat
ctacaggctattcggtccactcttgagcgttcagagagcgaaacgcgccagcgtctcaac
agccagctggagaagaaggaacaggagaactctcagttgcagaagaggctcgaacaagaa
gtggaacagcgtcacctgttcagcagaaaccaagaaatgcagttaatggacgtgaagagg
cagctggagacacaagttgctttaaatcagaaactcaargagcaactgaatgatgctgag
ttggagctcaacaccctcaagattcagcagggtagcaatgaaacacgccacaccctgagc
tccccgtctgcatccatcagaggtctgcagggttcagatggagacggagagaggctccaa
ggccgcctgcaactagccgaaacccgagtagaggagcaggcagagaggcttaaggtcatc
acctccaacatggagcagtacagagccatggctcaaagcctggaggagtctctggagagg
gagaaacaggtaacagagcaggtccgctcagccactgaaacccgtctgaaggaagctggg
gagcagcagcgcaggctggaggagaagctcctggaagcrgagaaagaaaaacaaaacctg
gaggagcagaaacggagcactgtggmctccctggaggagcagatcaatgacctgaagaga
aatctcagcagtgcccaggcagaacaccaggtgatgctgcagcagctggctgtagctgaa
actcagcaacagcaggctctgatggacagccaggagcaggctaagctagcagctgaagcc
caggataaatatgagcaggagatgattctgcatgcagctgatgtggaggctctgcaggcc
gtcaaggctcaagctcagcaggccgtcgagttcagacatcagctggaggagaaagtccag
cggctcagttctgagttactggaggccagagtctcctgggaagagcaggagaagatcctc
aaggaggagatgtccaagatggaaagccgccacgaggaattgcagaggcagaatacgctc
ctgcatgagcaggttcagacgttgagcaacaaactggctgacaatctgcaacgagcttct
agtgagagttcactcaacatatctttgactgaagagggaaaatctgaagaccagcttctt
gagattctcaggtttgttcgtcgagaaaaggagattgcagagtctcgttttgaggtggcc
caaggggaaactttgcgtcaccgtttgagagtggagcacttggagcgagagctcaaagag
gtgcaggacagtttgggtgctgcgagggaacgaatgcaggtaactgcaaagaccctggct
cagcacgatgaactaatgaacaagactgaaacaatgaacatcttggtggagaccaacaag
atgctgagagaggagaaggagaaaatggytcaggaactgcagcaaagccaagctaaggtg
cagcagctggagtctgaagttttgccgcttcaggaggctaactctgagctgagtgagaga
agtggcataatgacgggagagaagttgatactggaagaggaagtgaagcgctggaaggct
cgaacccagcaattagtgagtcaacaaagagattcagatcckgatgagttcaagcgtctg
cattctgagaaagaggtacacgtgaaacgcatccagcagctctgtgaggagaacggtaga
cttagtagggagttgaccaggacaaatgctaacacaatatccatccagggccaactgcag
aatgtgcgtgacartatgggtaaggtgaccgaggagaggaatgcattgaagagggaactg
gaaactaagacccaggaactccaggagaagatgcgaaccatcaaccaggttaagaagatc
gggcgacgctacaagactcagtatgaagagcttaaagtggaacatgacaaactggtggca
gaggctgcggcaggcccatcccaagacgaggaggcacgtcaagcctcggttcatgaactg
cagagcgttaaagattctttgagccagactgaaaccaggaacaaagagctggaaggacag
ctcgagaacatcaacaaggtggtyacggagcgagaggccgaggtacgcagtgctcaggaa
cagtctgccaggttgcaaacggagctracgaggttgaggcaggagctgcaggataaggct
tctcaggaggacaccttgaaacagcagatgactgagaaggaggagaagaccaggaaggtt
cttcttaatgccaagcagaaaatcagccacctcacaaattccaaagaccagatgcagaag
gagaacgaagaattgaaggagaagttaaaggaggcggagatgcgaatgagtgctctcaag
tctcaatacgagagccgacttagtaaacgatctcagcaggagagacaggatcagagagat
gaggcacctgaggcagggcctagcaagatccaggagcagcagaggggcacagagcagaga
cagatcagtttgaagaccacctcggctgcagacaggggcagtgcctgcacttctgagcct
ccaactgccaacattaagccaacacctgtagttgctacagcgagcaaacagaccaacatc
ccaagtaacaaacccactccacgagcaagcatcaggccgatgatcaccccggcccctgtg
cccacgccaacaccaactgctaccgtcatgcccaccacacaggtggagacacaggaagca
gccatgcagtcaagcgaaggcccgccggtggagcatgtgacggtgtacggcagtgccagc
ggctctgtgcgctccgccagccccaacgttcagaccacgctggctagccccatcctgacc
gttcagcagatccagacgcaggccacggcttttgttcagccaacgcagcagcagagcgtg
acccacccagaaccagccaatcaggagccaccgcctgtagtgatcgaagcagcgcctagt
cctcaggtggactggccgtcaacattccccaccacgtctgtgtttggcactgtttcagcc
acacctggaacttctgctttgaccaagaggcctcgtgaggaggaggaaagcagtgccgtg
gccatcgacaccgaggcagctcaggaggacaattccagggctcccatacctaaaaagctg
cgcatcaaccagagagtgggtcaggaggaggagatgcaggctgaggacagtgctgagcct
gagggggtggtgccaacagacagtcaagatggtgcagaagtgaaccagcagacagaggag
ttttcaaacctggaggaagccgaagacgctgcaacctcccagtcaatgtcagtggagcaa
ttattaacacccgcccaaagcgaaacccccgacccactgcagcacgaagttatcgtcatt
ttaactgacagcgagagtgaagaacacgaagaggagaggagttttcaaacctggaggaag
ccgaagacgctgcaacctcccagtcaatgtcagtggagcaattattaa
DBGET
integrated database retrieval system
