Austrofundulus limnaeus (annual killifish): 106517066
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Entry
106517066 CDS
T06063
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04310
Wnt signaling pathway
alim04520
Adherens junction
alim04916
Melanogenesis
alim05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106517066 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106517066 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
106517066 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106517066 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517066 (lef1)
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
106517066 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
POPLD
Motif
Other DBs
NCBI-GeneID:
106517066
NCBI-ProteinID:
XP_013863210
UniProt:
A0A2I4B647
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MPQLSGGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVHESES
SPNSNSHDAARQSQIQQDSYHEKHRDHPDDIKHQDMYSKGHPYPTYPSYIMMSNMNSDSY
INNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDASNKQGMP
RHHPGPEIANFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKQEPP
HDSDIMHMKSQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILG
RRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESAPGGKRNN
FSTCKAKAAATGPLLEMEAC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttatcgggcggcggtggcggggacccggagctctgcgccacggatgaaatg
atcccgttcaaagacgagggagacccgcacaaggagcagatcttcgccgagctcagccac
tcggaggaggagggagacctggcggacatcaagtcatctctggtccacgagtcggagagc
agccccaacagcaacagccacgatgcagctagacagtcccaaatacagcaggattcatac
cacgaaaaacacagagaccatccagatgatataaaacatcaagacatgtacagtaaaggc
catccatacccaacctacccgagctacatcatgatgagcaacatgaacagcgactcctac
ataaacaatggctccctttcgccgcccatgcccagaacatccaacaaagtccccgttgtg
cagccatctcatgcagtccaccccctcacgccgctgatcacgtacagcgacgagcacttc
gctccaggctcccattctggccatcacccccaggatgccagcaacaaacaaggaatgccc
aggcatcatcctggaccagaaattgccaacttctactccctgtctcccggaggagtgggg
cagatcacgccacccctgggatggttttcacaccacatggttcccggcccccctggtccc
cacgccacagggatcccccatccggctatcgttaacccacaggtcaaacaagaacctccg
cacgacagtgacatcatgcacatgaaatcccagcacgaacagagaaaagagcaagagccc
aaaaggccgcacatcaagaagccgctaaacgccttcatgctctacatgaaagagatgcgt
gcgaacgtggtcgccgagtgcacgctgaaggagagcgccgccatcaatcagatcctggga
cgaaggtggcatgctttgtctcgggaagagcaagctaagtattacgagttagctcgcaaa
gaacggcagctccacatgcagctgtacccgggctggtccgctcgagacaattatgggaag
aagaagaagcggaagagggagaagatgcaggaatcggccccaggaggaaaacggaacaac
ttctccacatgcaaagcgaaggcagcagctacgggccctctgctagaaatggaggcctgt
taa
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integrated database retrieval system
