Austrofundulus limnaeus (annual killifish): 106517083
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Entry
106517083 CDS
T06063
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106517083 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106517083 (herc3)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106517083 (herc3)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
HECT type E3
106517083 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
106517083
NCBI-ProteinID:
XP_013863241
UniProt:
A0A2I4B665
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MLCWGNARDGQLGIGVERNPVFEPRSCHVFSGRGLKEVVCGGQHTLFLLHDGSVYTCGSN
SCGQLGRNRDETSPELVVALDTQKITMVSCGRAHSMAINEQGQVFAWGACEGGQLGLETV
EIAVRIPRLVKRLCDHSISQVMCGNQHCMALSRDGQLFTWGQNTNGQLGLGKGEPSKLSP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNNELLPRRVLELMGTEVSQITC
GRHHTLALVPSSSMVYAFGCNSHGQLGTGLLGDSRSPFPIKTNFLTGNMQRDSKRYAVIK
IVCGGDHSFLLYSNDQTSAAQEDFRVVNINKSLSPISYERLNSWRLKLMYNTDSSVANDI
VSQLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNSVRILFEALSKPAFSGLLEQATKSF
ESLLIPQLPRSPPDVEAMRIYLILTEYPALQDSKNYVRLTIPLAMAILRLDTNPSKVLDN
WWCFVDGSFFTRMVDTYKSIVVFMLTGGKTHLVPMFYDNYFLATLRLLEKLHKVNLRANH
VEYSRFYIPDITSLVDIQEDYLKWFLSKAEIKVGSSPSQQNDFPSVNLCAFPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDICF
VEQNWFHLIGIICGLAIYNSTVVDLHFPLLLYKKLLDVSPTLEDFKELSPTEARSLQELL
DYEGGDVEETFLLNFSITRENYGVVEVKELVPGGQSISVDKHNRKEFVEAYLCYVFSDSV
SEQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEFTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMGSLRIIIQSTTAEEHYLPVAHTCYNLL
DMPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgccagggacggacagttggggattggcgtggagaggaacccc
gtgtttgagccgaggagctgccatgtgttcagtgggcgtgggctgaaggaggttgtgtgt
ggcgggcagcacacgctcttcttgctgcatgatgggagcgtgtatacgtgtggctctaac
agctgtggacagctgggccgcaacagggatgagacttccccagagctggtggtggctctg
gatacccagaagatcacgatggtttcgtgcggccgagcccattcgatggcgataaatgag
cagggtcaggtgtttgcgtggggggcttgtgaagggggacagctgggcctggaaactgtg
gagattgctgttcggattccaaggttggtgaaaagactgtgtgatcacagcatctcccaa
gtgatgtgtgggaaccagcactgcatggcactttctagagacggccagctgttcacatgg
ggccagaacaccaacgggcagctgggcctggggaaaggagagcccagcaagctgtctcct
catcctctgaagtctctggcagggattcctttggcccagataactgctggaggagaccac
agctttgccctgtccttgtccggagccgtgtttggttggggcaaaaacagagcgggacaa
ctgggtcttaatgataaacaagatcgagccgttccgtgtcacatcaagtttttgaggtct
cagaaagtcgtttacatcagctgtggagacgagcatacagcagccctcacaaaggatgga
ggattgtttacgtttggtgatgggtcgtggggccagctgggtcacggctcgaccaacaac
gaacttttaccgagacgggtgctggaactgatgggcactgaggtgtctcaaatcacctgt
ggcaggcaccacacgttggcgttagtgccatcctccagcatggtgtatgcgtttggttgt
aacagtcacggccaactgggtacgggcctgctgggagactcaagaagcccatttcctatc
aaaacaaatttcctaactgggaatatgcaaagagactcaaagcgatatgcagtgattaaa
atcgtctgtggaggagaccacagtttcttattgtactccaacgaccagacttcagcggcc
caagaggacttcagagtggttaatattaataaaagtctctccccaatcagctatgaaagg
ttaaactcgtggaggttaaagctgatgtacaacacagactcgagtgttgcaaatgatatt
gtaagtcaactctcctccacggcttgttggaacgccagcttcttggaccaaagtgatgac
actcatttcaaaaccaacccaaaaatcccaggcatcgatctgaactctgtcagaatcctg
tttgaggctctcagcaaaccggccttttctggactcctggagcaggccaccaagagcttt
gagagtctgttgatccctcagctgccgcgctcccctcctgacgtcgaggccatgaggatt
tacctcatcttaaccgagtacccagccctgcaggattccaagaactacgtccgcctcacc
attcccctggcaatggctatcctccggctagacaccaaccccagcaaagtattggataac
tggtggtgttttgtggacggcagcttcttcaccagaatggtcgacacgtacaagagcatt
gtggtttttatgctaacggggggcaaaacgcacctggtgcccatgttctatgacaactat
ttcttggccacgttacggctgctggagaaactccacaaggtaaacctgagggccaaccat
gtggagtacagccgcttttatatccctgacatcaccagcctggtggacatccaggaagac
tacctcaaatggtttctgagtaaagctgagatcaaagttggatcatccccttcgcagcag
aatgactttccctcagtaaacctttgtgccttcccgttcatcctgaacgctcaagccaag
actacaatgctgcaaactgatgctgaactgcaaatgcagatggccgtaagcggtgcaaac
ctgcacaatgtctttatgctgctcacactcgaaccccaccttgctagaaatccatacttg
gtgctccatgtgcgcagaaaccatttagtgagcgacacgctacgcgagctcaccatgtac
tccgacgtggacctcaagaaaccactcaaggtgatatttgatggcgaggaagctgtggac
gcaggtggtgtaactaaagagttcttcctgctgctgttaaaggagttgatggatccagtt
tatgggatgttcacacattacaaagaatccaacctgctgtggttctcagacatttgtttt
gtagaacaaaactggtttcatttgatcgggatcatctgcggtctggccatctataactcc
acagtggtggaccttcacttccccctgcttctctacaagaagctgctggacgtctcgccc
actctggaggacttcaaagagctctcacccacagaggccaggagtctgcaggaacttctg
gattatgaaggaggagatgtggaagagacatttcttctcaacttttctatcaccagggaa
aactacggggttgtagaagtcaaagagctggtacccggaggacagagcatctctgtggac
aaacacaacaggaaggagtttgtggaggcctacctgtgctacgtgttctcggactcggtg
tcggagcagtactcggccttctcctcgggcttcctgaaggtgtgcgggggggagatcctg
tcactgttccagccctccgagctgatggcgatggtggtcggcaacaacaattataactgg
gaggagatggaaaagaacgctgtttacaaaggggagttcaccgcgactcacccaacagtc
agattgttctgggaagttttccacgagttccctttggaaaagaagaagcagttcttattg
ttcctcaccggcagcgatcgtatccccatccacggcatggggagcctgcgcatcatcatc
cagtccaccacggccgaggagcactacctgcctgtggcccacacctgctacaacctcctc
gacatgccccgctaccagaccaaagagatcctgcggcgccgcctcacccaggctgtggag
cagtatgagggcttcagcctggtgtga
DBGET
integrated database retrieval system
