Austrofundulus limnaeus (annual killifish): 106517174
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Entry
106517174 CDS
T06063
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106517174 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106517174 (dhx15)
03009 Ribosome biogenesis [BR:
alim03009
]
106517174 (dhx15)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106517174 (dhx15)
Spliceosome [BR:
alim03041
]
Complex A
U2 snRNP components
U2 related factors
106517174 (dhx15)
Complex B
106517174 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106517174 (dhx15)
Ribosome biogenesis [BR:
alim03009
]
Eukaryotic type
90S particles
Helicases
106517174 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
AAA_29
AAA_7
Atrophin-1
nSTAND3
T2SSE
Motif
Other DBs
NCBI-GeneID:
106517174
NCBI-ProteinID:
XP_013863348
UniProt:
A0A2I4B6I0
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYTSSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDSKPYAAP
SNSMASVPSLPPLKQMAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKESFNDIITRQ
QSFVLVGETGSGKTTQIPQWCVDMVRALPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRPDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGTEVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLERIVAKLESKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacaccgtttggatttgggtgatgactacacctccagcaagaagaggtct
gatgggagagaccgggaccgtgacagagaccgtgaggaccgttccagggaccgggatcga
gacagagatcgagacagggacagagaccgggacagggactcraagccttatgctgctccc
tctaatagcatggcatctgtgccgagcttaccacctctcaagcagatggctatgcagcag
cagatcaaccctttcaccaacctgccacacacgccgcgctactatgagatcctgaagaag
aggttacagctcccagtgtgggagtacaaagaaagctttaatgatatcattacacgycaa
cagagctttgtccttgtgggagagacaggctctgggaagacaacacagatcccacagtgg
tgtgtagacatggtcagagccctgcctggtccaaagcgggcagtcgcttgtactcagccg
agaagggtggctgccatgagtgtggctcaaagggtggcagatgaaatggatgtcatgctt
ggacaggaagttggttactccatcagatttgaggactgtagttctgctaagactatacta
aagtacatgacagacggtatgttactgagagaggcaatgaacgaccctctgctggaacga
tacggtgtgatcattctggacgaggcacacgagagaactcttgccacagatatcttgatg
ggcgtgctgaaggaagtggttcgccaaagaccagatttgaaggtgatcgtgatgagtgcc
acactggatgctgggaagtttcaggtgtattttgacaactgccctctgctgacaatccct
ggacgcacacatcctgtagaaatcttttacacccctgagccagagcgggactaccttgag
gcagcgattcgcacygtcatccagattcatatgtgtgaggaggacgaaggtgactgcctg
ttgttcctcacaggccaggaggaaattgacgaagcctgcaagagaatcaagcgtgaggtt
gatgacctcggtaccgaagtcggagatatcaaaatcattccactgtattccacactgccc
ccacaacagcagcagaggatttttgaaccgccgcctccaaggaagccaaacggtgcgata
ggaagaaaggtggtcgtttcaactaatattgctgagacctctctaacaatcgatggtgtc
gtgtttgtcattgatcctgggtttgccaaacagaaggtgtacaaccctcgtatccgagtg
gagtctttgctagtcacggccatcagtaaagcttctgcccagcagagggcaggtcgagct
ggcagaacacgtccagggaaatgtttccgcctctacacagagaaagcatacaaaacagag
atgcaggataacacatatcctgagattcttcggtccaacttaggatccgttgtgctgcag
ctgaaaaagctgggtatcgatgatcttgtccactttgacttcatggatccaccagctcct
gagacgctgatgagagcacttgagctgctgaattatcttgcagctctcaatgacgacggt
gacctgacggagctgggctccatgatggcagaatttcctctggatcctcagctggcgaaa
atggtcattgcgagctgcgagtttaactgctccaatgagatcctctccatcactgccatg
ctgtcagtcccacagtgtttcgttcggcccacggaggctaagaaggcagcagatgagtcc
aagatgaggttcgctcacattgacggagaccacttgacgctgctcaacgtctaccatgcc
ttcaaacaaaaccacgaatctaaccagtggtgctatgacaactttgtcaactaccgttcc
ctgatgtctgctgacaatgtgcgtcagcagctgtccaggatcatggaccgcttcagcttg
cctcggagaagcacagagttcaccagcagagattactacatcaacatccgacgagcgctc
tgcaccggcttcttcatgcaggttgctcatttggagcgcacgggccattacctcaccgtc
aaagacaaccaagtggtccagctgcacccatctactgtcctagaccacaagcctgagtgg
gtgctctacaatgaatttgtcctcaccaccaagaactacatccgcacttgcacagacatc
aaaccagagtggctggtgaagattgcaccccagtactacgacatgagtaactttccacaa
tgtgaagctaaacgacagctggagcgaattgttgccaagctggagagcaaagagtattct
cagtactga
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