Austrofundulus limnaeus (annual killifish): 106517289
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Entry
106517289 CDS
T06063
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03030
DNA replication
alim03410
Base excision repair
alim03420
Nucleotide excision repair
alim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106517289 (rfc4)
03410 Base excision repair
106517289 (rfc4)
03420 Nucleotide excision repair
106517289 (rfc4)
03430 Mismatch repair
106517289 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alim03032
]
106517289 (rfc4)
03036 Chromosome and associated proteins [BR:
alim03036
]
106517289 (rfc4)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106517289 (rfc4)
DNA replication proteins [BR:
alim03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106517289 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
106517289 (rfc4)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106517289 (rfc4)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106517289 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
106517289 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_11
AAA_30
DUF815
Mg_chelatase
AAA_24
AAA_19
SLFN-g3_helicase
RuvB_N
AAA_14
ResIII
AAA_28
AAA_7
wHTH-PRTase_assc
AAA_5
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
106517289
NCBI-ProteinID:
XP_013863503
UniProt:
A0A2I4B6Y5
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MQAFLKGATQTSRPQKDKSAAGPSSEKRAKAVPWVEKYRPKCVDDVAFQEEVVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAATRELYGPELYRQRVLELNASDERGIQVIREKVKNF
AQLTVSGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLADQIQEERLLEICAKENLKYTKESISTLVQLSEGDLRKAITFLQ
SAARLSPDKEITDQVIIEIAGVVPSKMIDSLLQICLKGTFEKLEVAVGNMVDEGYAATQI
LTQLHDAILKQDIGDKQKSAIAEKMAVVGKCLADGADEYLQILSLCSVIMQQASQS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttaaaaggagcgactcaaacgagcagacctcagaaagacaagtcagca
gcaggaccgagctcagagaaaagagccaaggctgttccctgggtggagaaatacagacca
aaatgtgtggatgatgtggccttccaggaggaggttgtagcagtgctgaagaagtcttta
gaaggagcagatctcccaaacctgcttttctacggtcctccaggaacagggaagacgtcg
accatcttagctgctaccagagaactttatggcccggagctgtacagacagagagttctg
gagctgaacgcctcggacgaacgagggatccaggtcatcagagagaaagtcaagaacttt
gcgcagctcaccgtgtctgggactcgtccggatgggaagccatgtcctccgttcaagatc
atcatcctggacgaggccgactccatgacggctccggctcaggccgctctcaggcggacc
atggagaaggagtctcgcaccactcgcttctgtctcatctgtaattacatcagcaggatt
atcgagccgctcacgtccaggtgctctaagtttcgcttcaagcctttggccgatcagatc
caagaagagcgcctgctggagatctgtgcaaaggagaacctcaagtacacaaaggagagt
atctcaacactggtgcagctgtcggagggagacctgcgtaaagccatcaccttcctgcag
agtgctgcccgcctcagcccagacaaggagatcaccgatcaggtcatcattgagattgca
ggggtcgtcccttccaaaatgatcgacagcttgctccagatttgtttgaaaggaacgttt
gagaaactagaagttgccgtcgggaacatggtggatgaaggttatgcagccacacagatc
ctgactcagctccacgacgccatcttgaaacaagacatcggagataaacaaaagtcagcc
attgctgagaaaatggcagttgtggggaagtgcctggccgatggagcagatgaatacctg
cagatattgagtctgtgttcagtcatcatgcagcaagcctctcaaagctaa
DBGET
integrated database retrieval system