Austrofundulus limnaeus (annual killifish): 106517319
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Entry
106517319 CDS
T06063
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106517319 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106517319 (rad54l)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106517319 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
DEAD
Motif
Other DBs
NCBI-GeneID:
106517319
NCBI-ProteinID:
XP_013863536
UniProt:
A0A2I4B712
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MRRSFAPSQVAKRKLASSEDDEDCRQKTEKRRHCDEVRQSQMSPCRKPLSQLNNRPAAVD
TDRHEAFIRSILSKPFKVPIPNYTGCLGIRALGLKRAGVRRALHDPFAEDALVLYEPPVL
SSHELIKADKEKLPVHVVVDPVLGKVLRPHQREGVRFLWECVTGRRIPGSYGCIMADEMG
LGKTLQCIALMWTLLRQSPDARPEIDKAIVVSPSSLVRNWYNEVGKWLGGRLSPVAIDGG
SKEEIDKQLVNFISQHGLRVPTPILIISYETFRLHAEVLHKGKVGLIICDEGHRLKNSDN
QTYQALNAMGGQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRD
ADASDKERQTGEEKLKELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKL
FLRQAKPLESLQEGKISISSLSSITSLKKLCNHPALIYDRCVEGEGGFEGALDLFPPGYN
TKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRHRRYLYVRLDGT
MSIKKRAKIVERFNSPQNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMAR
VWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFT
LNEETSSDTHDKFRCCRCVNGREVRPPAEDSDCTSNLSQWSHCSDKKGLRDQVLKASWDA
AVSFVFHQRSHEDQRTVV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagctttgctcccagtcaggtcgctaaacggaagctggcttcgagtgaagat
gatgaagactgcagacagaaaacagagaagagaagacattgtgacgaggtgagacaaagt
cagatgtctccctgtagaaaacctctgagccagctcaacaacaggcctgcagctgtggac
acagacagacatgaagccttcattcgaagtattctctccaagccttttaaagttcccatt
cccaattacacaggttgtcttggaatccgagctctgggtctgaagcgggccggagtaagg
cgagcgctccatgatccgtttgcagaagacgccctggttctttacgagcctccggtcctg
agctcccatgaactgatcaaagctgacaaagaaaagcttccagttcatgttgttgtggat
ccagttttaggaaaagtacttagaccccatcagagagagggggtgaggtttctgtgggag
tgtgtgacgggcaggcgcatcccgggctcgtacggctgcatcatggctgatgagatgggc
ctggggaagacgctgcagtgcatcgccctcatgtggaccttactgcggcagagccccgac
gccaggcccgagatagacaaggccatcgtggtttcaccttccagtctggtgcgcaactgg
tacaacgaagtgggaaagtggctgggaggccgtctttcaccagtggctattgacggaggc
tcaaaggaggagatcgataagcagctagtgaacttcatctcccagcacggtttaagagtt
ccgaccccaatcctgatcatttcgtacgagacgtttcgactgcacgctgaggtcctgcac
aagggcaaagtcggtcttatcatctgcgacgagggccatcgactgaagaactccgacaac
cagacgtaccaggctctgaacgccatgggtggtcagaggagggtgctgatatcaggcact
cccatccagaacgatctgctcgagtatttcagcctggtccatttcgtgaatgctggaatc
ctcggaacagctcaagaatttaaaaagcgattcgagcttcccatcctgaagggtcgggac
gcagacgccagtgataaagaacgacagacaggagaagagaaactcaaagagcttattggc
atcgtcaacaggtgtttgatacgaagaacatcagatatcctgtccaagtatcttcctgtg
aagattgaacaggttgtgtgctgcaggctgactcctctgcagactgaactctataagctg
ttcctacggcaggccaaacccctggagtccttacaggagggcaaaataagcatttcctcc
ctgtcctccatcacatccctcaagaagctctgcaatcacccagctctgatctatgacagg
tgtgtggaaggtgaggggggcttcgagggggctctggacctgtttcctccaggctacaac
acgaaagctgtcgagcctcagctctctggaaagatgcttgtcctggattatattctggca
atgactcggaccacgaccagtgacaaggtggtgctggtctccaactacactcaaacactg
gacctgtttgagaaattatgtcgacacagacgatacctgtacgtcagactggacggcacc
atgtccatcaagaaaagagccaagattgtggagcgattcaacagtccacaaaacccagag
ttcatcttcatgctgagcagcaaagctggaggctgtggcctgaacctgatcggtgcaaac
cgcctggtgatgtttgacccggactggaaccctgccaacgatgagcaggccatggctcgg
gtgtggagggacggccagaagaagacctgctacatctacagacttctctccacggggacc
atcgaggagaagatcctccagagacaggcccataagaaagccctgagcagctgcgtggtg
gacgaggagcaggatgtggagcggcacttctctctgggggaactccgagaactgttcacg
ctcaacgaagagacatccagcgacacgcacgacaagtttcgctgttgccgctgtgtaaat
ggcagagaagtgaggccacctgcagaggactctgactgcaccagcaacctttcccagtgg
agtcactgctcagacaaaaagggcctgagggaccaagtactcaaggcatcctgggacgct
gctgtgtccttcgtctttcaccagcgctctcatgaggaccagaggacggttgtgtag
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