Austrofundulus limnaeus (annual killifish): 106517463
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Entry
106517463 CDS
T06063
Name
(RefSeq) transcription factor Sox-17-alpha-A-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517463
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106517463
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Chlor_dismutase
AmyB_C
Motif
Other DBs
NCBI-GeneID:
106517463
NCBI-ProteinID:
XP_013863770
UniProt:
A0A2I4B7Q4
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MTAARGSSPQVTMRISQDPARLQLPEGEDLCSADGEPMNDARSPSSGPSSPLSVNSDSSC
ASPEAKCGPAPQRVRRPLNAFIIWTKEERRRLAQLNPELENTDLSKILGKTWKAMSLAEK
RPYMQEAERLRVQHTXDYPNYKYRPRRRKQMRKSSKPQAAETPPLCSSGFGVPCNLTCLL
QNQQQPHHNSLPFPLHSSYRNHSGFPPSAAARTAPSNPGLYSTPSGHQAGPQVYFGSQFG
HTQQGFPTSAGPVTEGGESRVCGLPPCPSGPSLEFYLEQVQLDMLYDLDRSEFEQYLGPN
YYKPGPAELSSFHQQSSHRGGHSVS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggcccgcggatcatccccgcaggtaaccatgcgcatcagccaggaccccgcg
cgcctccagcttccagaaggcgaggatttgtgctccgcggacggcgagccgatgaacgac
gcgcgctccccgagctccgggccctccagtccgctgtccgtcaactcggactcgagctgc
gccagccccgaggccaagtgtggcccggcaccgcagcgggtcaggaggcccctgaacgcc
ttcatcatctggaccaaagaggagcgcaggcggctggcgcagctcaacccggagttggag
aacacggatttgagcaaaatactcggtaaaacatggaaggccatgtccttggctgagaag
cgtccctacatgcaggaggctgaacgactgagggtccagcacaccatrgattacccaaac
tacaagtacaggcctcgcaggaggaagcagatgaggaagagctcaaagcctcaggctgca
gaaactcctccgctctgcagctcaggcttcggtgttccctgcaacctcacctgtctgctc
cagaaccagcagcagcctcaccacaactccctgcctttcccacttcacagcagctacaga
aaccactcaggttttccaccctcagctgcagcacgcacggccccgagcaaccccggcctg
tactcaacgccctctgggcaccaagccggacctcaggtgtactttggctcccagttcgga
cacacacagcaggggtttcccacttctgcagggccggtcacagagggaggcgagtccagg
gtctgcgggctcccgccatgcccatcagggccctcgctggagttctacttggagcaggtt
cagctggacatgctgtatgatctggaccgcagcgagtttgaacagtacctcggtccgaac
tattacaaacctgggccagcagagctcagcagcttccatcagcagagcagccacagagga
ggacactcagtatcataa
DBGET
integrated database retrieval system
