Austrofundulus limnaeus (annual killifish): 106517464
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Entry
106517464 CDS
T06063
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106517464 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517464 (sox17)
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106517464 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
106517464
NCBI-ProteinID:
XP_013863771
UniProt:
A0A2I4B7Q2
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSSPDAGYASDDQTQARCAMSVMMPGMGHCQWADPLSPLGDAKVKNEPCASGSGSQSRGK
SEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVPEKQPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLVHSVPDHQSQAMPGEGRVCMESLGLGY
HEHGGFQVPPQPLGHYRDPQALGGPSYEAYSLPTPDTSPLDAVDSDFFSPHPQEDCPMMP
AYTYHSQVADFQPQEPLANHHSNPLMHRHPASAPEQPHQPPSYMGCPNTLAVYYTQHCGS
SHPKRHPGGMGQLSPPPDPHSHSADSMEQMHHSELLAEVDRSEFEQYLSSSSARPEMAGL
AYGPHEAGMQGPESLISSVLSDASTAVYYCNYSNS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgtgcgatg
tcagtcatgatgcctggaatgggacactgccagtgggccgaccctctcagtcctctcggg
gacgccaaggtgaagaacgagccgtgcgcctccggctccggcagccagagccgcgggaag
agcgagccgcggatccggcggcccatgaacgcgttcatggtgtgggccaaggatgagcgc
aagaggctggcgcagcaaaacccggacctgcacaacgcagagctgagcaaaatgctgggg
aaatcatggaaagcccttcctgtcccagagaagcagcccttcgtggaggaagctgagcgc
ctgcgggtccaacacatgcaggaccacccaaactataagtaccggccccggcggcggaag
caggtgaagaggattaagaggctggactccggctttctggtccacagcgtgcccgatcac
cagagccaggcgatgcccggggaaggccgagtgtgcatggagagcctgggcctcggctac
cacgagcacggtggcttccaggttcctccgcagccyctgggtcactacagagacccccag
gctcttgggggtccctcttatgaagcctacagcctccccacgcccgacacgtctcctctg
gacgctgtcgattcagacttcttttcaccgcaccctcaagaggactgccccatgatgcct
gcgtacacgtaccactctcaggtggcagattttcagcctcaggagcccctcgccaaccac
cacagtaaccccctcatgcaccgacacccggcctctgcaccagagcagccccatcagcct
ccctcctacatgggatgccccaacactttggccgtgtactacacccagcactgcggctcc
agccaccccaagcggcaccccggtgggatgggacagctctccccgcctcccgacccccac
tcccactcagcagacagcatggagcagatgcaccactccgagctgctggccgaggtggac
cgcagcgagttcgagcagtacctgagctcgtcctcggcgcgtccagagatggcaggtctg
gcgtacgggccgcacgaggccggcatgcaaggacctgagagcctcatatcgtccgtgctg
tcagacgccagcacagccgtgtactactgcaactacagcaactcctaa
DBGET
integrated database retrieval system
