Austrofundulus limnaeus (annual killifish): 106517569
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Entry
106517569 CDS
T06063
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106517569 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106517569 (nup58)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106517569 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Siah-Interact_N
Tox-ODYAM1
Mitofilin
GCP_N_terminal
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
106517569
NCBI-ProteinID:
XP_013863932
UniProt:
A0A2I4B881
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MSGFNFGSGTLGSTNTGGGFAFGTATSAPAPSTGGFSFGTPLGSAAAAPVSTTSSIGLGS
SLFAQKPAGGLSFNTITSTASAPTTGLTLGAPAVTSAATGFSLSFNKPTASATPFSLTTG
TSSSTAGSGLTFGSVLTSTAPQQPAAPGFTLGLGGTAISTAASTVPSLGLSCFSSTGTTG
LGQPTLGGVGLTLGSLLATSTAASAAPAPSIGLGGVDFSTSSENKSATSSGTNAQDSKAL
KDENLPPCICQDVENFQKFVKEQKQVQEDISRMSSKAISKVQDDIKSLKQLLSVCASALQ
RQALAIDKLKFETAQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVDQFEVQLQQYRQ
QIEELENHLTTQSSXSHITPQDLTLAMQKLYQTFVAQAAQLQSVHENVKILKHQYLSYRR
AFLEDSTDIFESKRASDRKWQSAPRVTTGPAPFSSVPNAAAVAMAATLTQQQQPTPGTQA
PLGAGFGNPFAGXSLGTSTLGGFGGGPGFVGVGTGGSSFGFSTSKPTGGSLSAGFGGSSS
SSGFNFSNPGINQSAGLTFGVSNQPTAGFATGAPLLQLKKPPAGNKRGKR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttaactttggttcggggactctaggttccaccaacacgggtggtggattc
gcattcggaaccgcaacaagtgctcctgctcccagtaccggtggcttttcttttggaact
cctcttggatcagcagctgctgccccagtttccaccaccagctctattggtctaggaagc
agtcttttcgctcaaaaacctgcgggaggactttcttttaatacaattacttcaactgct
tctgcacccactactggccttacgttaggtgccccagctgttacatctgctgccactggc
tttagtttaagtttcaacaagccgactgcctcagcgacccccttctccctcaccaccggt
accagctcctctactgcagggtcaggcttaacatttggctccgtcttgacctctacagcc
ccacagcagcctgcagccccgggtttcaccctcggccttggcggcacagccatctccaca
gcagcctcaacggtgccgtcactgggcttaagttgtttttccagcactggaaccacaggt
ttgggtcagccaactcttggaggagttgggttaaccttggggtctctattggctacctcc
acagcagcgtcggctgctcctgctccaagcatcggtctgggtggcgtcgacttcagcacc
tcctctgagaacaagagcgccacatcatccggaaccaatgcacaggacagtaaagcttta
aaagatgagaacttgcccccatgcatttgccaagatgttgaaaactttcaaaaatttgta
aaagagcagaagcaggttcaggaggacatcagcaggatgtcatcaaaggcaatttcaaaa
gtccaagatgacatcaaaagcctcaagcagctcctgtctgtgtgcgccagcgctctgcag
cgccaggctctggccatagacaagctgaagttcgagactgcgcaggagctgaaaaatgct
gacattgctctgcgcactcagaagacccctcctggacttcagcatgaaaacacagctcca
tcagattattttcgcagcttggtggatcaattcgaggtgcagctgcagcagtacaggcag
cagatagaagagctggagaatcacttgacgacgcagagcagcrgctcacacatcacccct
caggatctcactctagccatgcagaaattataccagacatttgttgcacaggctgctcag
cttcaatctgttcatgagaatgtaaagattttgaagcaccagtacctttcctaccgccga
gccttcctggaagactccacagacatcttcgagtccaaacgggcgtctgacaggaagtgg
cagagcgcgccgcgggtcacgaccgggcccgccccgttctccagcgtacccaacgcagca
gctgttgcaatggcagccacgttgacgcaacaacagcagccaactccagggacccaggcg
cccttgggggcagggtttggaaacccctttgcaggcartagcttgggcacttctaccctg
ggaggttttggtggtgggccaggatttgttggggtgggcacggggggttcttctttcggc
ttctccaccagtaagcccacaggaggcagtttaagcgcaggtttcggcggcagcagcagc
agctctggctttaactttagcaaccccggcatcaaccagtccgcaggcctgacctttggt
gtgtccaaccaaccgacggctggctttgctaccggagcacctcttctccagctgaagaag
ccccctgctggtaataaaaggggcaagagatag
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