Austrofundulus limnaeus (annual killifish): 106517730
Help
Entry
106517730 CDS
T06063
Symbol
tnxb
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106517730 (tnxb)
04518 Integrin signaling
106517730 (tnxb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106517730 (tnxb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106517730 (tnxb)
Glycosaminoglycan binding proteins [BR:
alim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106517730 (tnxb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_Teneurin
Fn3_Dep-1_2nd
EGF_TEN
EGF_2
fn3_2
FN3_Tor_3rd
EGF_Tenascin
Fn3_R-PTP-O
Fn3_PBP1
Interfer-bind
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
106517730
NCBI-ProteinID:
XP_013864176
UniProt:
A0A2I4B8Q1
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MISGYSSRLKMLFTLGLLLLLTPLPSFETTTNQKRDARGSNVTKTNTVLTLLKPKTTSKQ
IANPALKPNPVNTTVLPTSGSNQKPTTASPTKTPKTRLSVAVNQTTSAAAKAAPTSIIMN
KDKHKVNQTASRDNPAPTGAPKVQSTSTKAPSTSKTTKIKPQHSANPSPSPKPSSTSGAK
MIEEKPNQTVQLISGKNVSVNHSKTVKNKPTASANQTIDADNRPSSDENSKDHPTSTTNV
HNVPSKPAKDDKVSDSTADKNKATPSANHTSTTTTVKEKPAPSQPIKVVISDGCDSSHAK
EQELTLKPGAPLLMTHKISLLPGGCTGECEAEMADLKGRVARLEKEMSFLLGNCPCSANC
PNDCSGNGKCEKGKCICHQGFMGPDCSKCAQGAKCNEVSESNRNEKEKEKNMTIQEKKNI
TKVDNKGLTEGFENKATNTKVGSNAKEGHVKPQDNKKTSDNKINEKTDRSEQEALQGKPQ
TKNVSPTNNPKPDQKKNDKEYLNLDNIKDDPLSNVTQGNTKKTNGTAKVETNTSQNTSPK
KNKKEHDVTRKPTLAEMKNPQSSEKKQSNTDKPENKNEQATENRKTPGVAAKDKVIQKNQ
HVTNTTNKMTERTNVLKNKTEIHRTKMTGGLGSMKVENISSHSFTVNWLAPQGMFKNFTV
IRKEPLTESEHEEELEVEAAAWNSTEAQHESTNLTVSSSKTAGFKDKTETKRISMVLPGN
VRSVEFSNLRADTHYSLQIYGTTAERRSKIHRVTAITGPKPPTKLVFSNVTENSVAVSWT
KPKTVFTGFRVTYINKATGKSRYVSVSSQQSHVVLSELSSGSSYTISVTTVKGRAQSDEL
TSVITTVPAPPTHLQVNNVTDTRAVLQWTPSLGKVDSFIINYESSKTPNVTVTVMLSGSS
AQYQLKGLQRGTLYKVKVLSQKGSLKSVAISSTFTTANVVKASEVGARSAVITWRTPVVY
HSYRVIYQVAGEKAKEVILEPTYTEYKLTGLIPLSRYTVLVQGEKNERYTSLVTSQFITG
KVRFPFPTECSQELLNGALESGEVDIYPQGKEGQAVRVYCDMETDGGGWTVFQRRTNGKT
DFYRTWSDYKAGFGNLSEEFWLGNELLHSLTSMGPVSLRVDIRAGNDTVYAHYTNFSIAS
EEKNYILTVSGYTGTAGDSMRYHNGRPFSTRDKDPDPVGIHCAKAYMGGWWYKNCYKVNL
NGLXGTSSKNQGVVWIDWKGKDFSIPFTEMKFRPSRFSPATHG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgatatctgggtacagcagcaggctcaagatgctgtttactctaggacttctcctcctc
ctcaccccacttccctcttttgaaaccacaaccaatcagaagagagatgccagaggaagc
aatgtgaccaagaccaatactgttctcactctcttaaaaccaaaaaccacttccaaacag
attgcgaaccccgcccttaaaccaaatccagtcaacacaacggttttaccaacatcaggt
tccaaccaaaaacctacaacagccagccctaccaagacacccaaaaccaggctcagcgtt
gcagtaaatcaaaccacttcagcagcagcaaaggctgctccaactagcatcatcatgaac
aaagacaaacacaaagtcaaccagactgcttccagagataaccctgcacccaccggagct
ccaaaggttcaatcaacatctacaaaagctccttcaaccagtaaaacaacaaaaatcaaa
ccccaacactctgccaatcccagtccttcaccaaaaccttcatcaaccagtggggcgaaa
atgatcgaagaaaagcctaatcaaaccgttcagctcatttcagggaagaatgtttcagtc
aatcacagtaaaactgttaaaaacaagcctacagcctctgcaaatcaaaccattgatgcc
gataaccgtcccagcagtgatgaaaactccaaagaccatccgacttcaacaacgaatgtt
cacaatgttccatcaaaaccagcaaaagatgacaaagttagtgattcaactgcagacaaa
aacaaagcaacaccctctgcaaatcacacttcaacaaccaccaccgtcaaagaaaagcct
gccccttcacagccaatcaaagtggtcatcagtgacggctgtgactcaagccacgcgaag
gaacaggagttgaccctgaagcctggcgctcctttattgatgacacataaaatcagcctg
ctccctggtggctgtactggagaatgtgaagctgagatggccgatttgaaaggacgtgtg
gccagactggaaaaagaaatgtcctttttattggggaactgtccatgttctgcaaattgt
ccaaatgactgtagtggaaatgggaaatgtgagaaggggaaatgtatctgccatcaagga
tttatgggtccagactgcagtaagtgtgcacagggtgccaagtgtaatgaagtttcagaa
agtaacaggaatgaaaaagaaaaagagaagaacatgaccatacaggaaaagaaaaacatc
actaaagtggacaacaaagggctgacggaagggtttgaaaacaaagctaccaataccaaa
gtaggatctaatgcaaaagagggacatgtgaaaccacaagacaacaaaaaaacttctgac
aacaaaattaatgaaaaaactgacagaagcgagcaagaggctctccaagggaaaccccaa
accaaaaatgtttctccaacaaacaacccaaaacctgatcagaaaaaaaatgacaaagaa
tatcttaatcttgacaacataaaagatgatcctctatccaatgtaacacagggtaatacg
aaaaaaactaatggcacagctaaagttgaaaccaatacttctcaaaacacaagtccaaag
aaaaacaaaaaagaacacgacgtaaccaggaagcccacactagctgagatgaagaacccy
caatcatctgagaaaaaacaaagcaacactgataaaccagaaaacaaaaatgagcaagct
actgaaaacaggaaaactccaggtgtggctgcaaaagacaaggtcatacagaaaaatcaa
catgttacgaacacaactaataaaatgacagagaggacgaatgtccttaagaacaaaaca
gaaatccataggaccaaaatgactggcggtttagggtcgatgaaagttgagaacatttcc
tcccacagctttaccgtcaactggctagcacctcaaggaatgttcaagaatttcactgtg
attagaaaagagccactgacagagagtgagcatgaggaagagcttgaagtggaggctgca
gcctggaactcaactgaggcacaacatgagagcaccaacttaaccgtctcctccagcaaa
acagctggattcaaagataaaactgaaaccaagaggatctctatggtgctgccgggcaac
gtacgctctgtggagttcagtaatctcagagcagacacccactactctctgcaaatctat
gggactacggcagagagaagatccaagattcacagagtaacagcgataactggtcctaaa
ccacccaccaaactggttttcagcaacgtaacagaaaattctgttgctgtttcctggacc
aaaccaaagactgtttttacaggcttcagagtaacatacatcaacaaggcaacagggaag
agccgctacgtgagcgtgagctctcagcagtcacatgttgttctgtccgagttgtccagc
gggtcatcctacactatcagtgttaccacagttaaaggcagggctcagagtgatgagctc
acatctgttatcaccacagtgcctgcccctccaacacatcttcaagtcaacaatgtaacc
gataccagagctgtgctgcaatggacccccagcctggggaaagtagacagtttcatcatc
aactacgagtcctccaaaactcccaatgtracagtaacagtgatgctgtcaggaagctca
gctcagtaccagcttaaaggcctgcagagaggcacgctgtacaaggtcaaagtgctgagc
caaaagggcagcctcaagagcgtggccatctcatctactttcactactgcaaacgtggtt
aaagccagtgaggttggtgctcgctccgcagtgatcacctggagaacgcccgtcgtttat
cacagctacagggtgatctatcaggtggcaggagagaaggcaaaggaggtgatcctggag
cccacctacacagaatataaactgacaggcctgataccgctgtcacgctacaccgttctg
gtacaaggggagaaaaacgaacgctacacatctcttgtcacctcacagttcatcactggg
aaggtgcgtttcccttttcctacagagtgttcccaggagctgctgaatggagccctggag
tcgggggaggttgacatctacccacaaggaaaagagggacaagcagtgagagtctactgt
gacatggagactgatggaggcggctggacggtgttccagagaagaacaaatggaaaaaca
gatttctacaggacctggagtgactacaaagctggctttggaaacctgagcgaagaattc
tggcttggtaatgagctcctgcacagcctgaccagtatgggccctgtgagtttgagagtg
gacataagagctggaaacgacacagtttacgctcactacaccaacttctccatcgcttcg
gaggagaagaactatatccttactgtgtccggctacacgggaacagcaggtgactcgatg
aggtaccacaatgggcgtccattctcaacccgagacaaggacccggaccctgtggggatc
cactgtgccaaggcctacatgggaggctggtggtacaaaaactgctacaaggtcaacctc
aacggcctttwyggcaccagcagtaaaaatcagggagtcgtctggatagactggaaaggt
aaagacttctccattcccttcactgagatgaagttcagaccctccaggttctcccctgca
actcacggctaa
DBGET
integrated database retrieval system
