Austrofundulus limnaeus (annual killifish): 106517732
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Entry
106517732 CDS
T06063
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like
KO
K08525
retinoid X receptor beta
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03320
PPAR signaling pathway
alim04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
106517732
03320 PPAR signaling pathway
106517732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517732
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alim03310
]
106517732
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106517732
Nuclear receptors [BR:
alim03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
106517732
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
106517732
NCBI-ProteinID:
XP_013864179
UniProt:
A0A2I4B8V7
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MSTQQPNSSASNSPSSILGSPFSVISPTLNSPVVSPSLGFGPINSSQISSSAPVSGMHSV
SSSEDIKPPFGLRPLQTPSPGVMTSQKRLCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRNREREGELEFSVGV
NDEMPVEKILEAETAVDMRTELHSDGGSAGNSPHDAVSNICQTADKQLFALVEWAKRIPH
FSELPLDDQVILLRAGWNELLIASFSHRSIPLKDGALLASELQRDGAHMTGVGAIFDREN
VQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNPDAKGLSSTTEVELLREKV
YASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLE
APHQLA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcmacacagcagccgaacagctcagcctccaacagtcccagcagcatcttaggttct
cctttttctgtgatcagtcccactctcaactcccctgtggtctcaccttctctgggattt
ggacccatcaacagcagtcagatctcttcttcagcacctgtatcagggatgcattcagtc
agcagctcagaagatattaaacctccrtttggcctcaggcccctacagactccgagccca
ggagtaatgacgtcccagaagcgactgtgtgtgatctgtggtgaccgctcttctggcaag
cactatggcgtgtacagctgtgaaggttgcaaaggtttctttaaacgaactgtacgcaaa
gacctgagctacacctgcagggataacaaagagtgcctggttgacaaacgccagcgcaac
cgttgccagtactgccgctaccagaagtgcctggctatgggtatgaagagagaagcggtt
caggaggagcgtcagaggaaccgggagcgtgagggcgagctggagttcagtgtcggagtg
aacgacgagatgccggtggagaagatcctggaggcagagacggccgtggacatgaggact
gagctccactctgacggaggctccgctggaaactcgcctcatgatgctgtttccaacatc
tgtcagactgcagacaaacagctgtttgctttggtcgagtgggcgaagagaatccctcat
ttttctgaactgcctcttgatgatcaggtcattcttctgcgtgcagggtggaatgagctc
ctgattgcttcgttttctcatcgctctatccctttgaaagatggagccctgttggcgtcc
gagctgcagcgtgacggcgcacacatgacaggagttggagccattttcgatcgggagaat
gtgcagagtgcagaagttggtgccatatttgacagggttcttactgagcttgttaacaaa
atgagagatatgcaaatggacaaaacagagctgggctgtcttcgtgcgatcgtcctgttt
aacccagatgcgaaggggctctccagcacaactgaggtggagctacttagagaaaaggtc
tatgcatcactggaagcttactgcaaacagaagtatccagagcagcagggaaggtttgct
aagctcctcctcagactgccagcgctgcgatccatcggcttgaagtgcttggagcatctc
tttttcttcaaactgatcggtgacacgccaatcgacacgttcctcatggaaatgctcgaa
gcgccccatcagctggcttag
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